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scnpilot_solids2_trim150_scaffold_1078

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1078_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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223..2112
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN6_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1078_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2216..3016
DNA (801bp) protein (267aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIL89176.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EIL89176.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN5_9GAMM rbh
3-hydroxybutyrate dehydrogenase
scnpilot_solids2_trim150_scaffold_1078_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3111..3866)
DNA (756bp) protein (252aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN4_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL89175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_1078_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3889..4587)
DNA (699bp) protein (233aa)
Cell division protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN3_9GAMM rbh
Cell division protein {ECO:0000313|EMBL:EIL89174.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division protein
scnpilot_solids2_trim150_scaffold_1078_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4587..6275)
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN2_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1078_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6784..7455)
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN1_9GAMM rbh
DNA repair protein radc {ECO:0000313|EMBL:EIL89172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair protein
scnpilot_solids2_trim150_scaffold_1078_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7554..8759
DNA (1206bp) protein (402aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:EIL89171.1}; EC=6.3.2.5 {ECO:0000313|EMBL:EIL89171.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN0_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1078_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8756..9214
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1078_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9275..11620
DNA (2346bp) protein (782aa)
Phosphomannomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM8_9GAMM rbh
Phosphomannomutase {ECO:0000313|EMBL:EIL89169.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphomannomutase rbh
scnpilot_solids2_trim150_scaffold_1078_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11676..12320)
DNA (645bp) protein (215aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM7_9GAMM rbh
ABC transporter ATPase {ECO:0000313|EMBL:EIL89168.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1078_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12447..13094)
DNA (648bp) protein (216aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Orotate phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM6_9GAMM rbh
orotate phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_1078_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13247..14017
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM5_9GAMM rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL89166.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
exodeoxyribonuclease III
scnpilot_solids2_trim150_scaffold_1078_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14007..15323
DNA (1317bp) protein (439aa)
Signal transducer n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM4_9GAMM rbh
Signal transducer {ECO:0000313|EMBL:EIL89165.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Major Facilitator Superfamily transporter rbh
scnpilot_solids2_trim150_scaffold_1078_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15481..15783
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89164.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1078_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15753..16886)
DNA (1134bp) protein (378aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM2_9GAMM rbh
molecular chaperone
scnpilot_solids2_trim150_scaffold_1078_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16899..18344)
DNA (1446bp) protein (482aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM1_9GAMM rbh
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EIL89162.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metalloendopeptidase-like membrane protein rbh
scnpilot_solids2_trim150_scaffold_1078_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18526..19737
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM0_9GAMM rbh
Displaying 17 items

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