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scnpilot_solids2_trim150_scaffold_1086

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1086_1
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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57..320
DNA (264bp) protein (88aa)
Transposase IS3/IS911 family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF12_FLUTR
Transposase {ECO:0000313|EMBL:KIA88777.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
transposase IS3/IS911 family protein
scnpilot_solids2_trim150_scaffold_1086_2
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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542..1171
DNA (630bp) protein (210aa)
integrase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CAB5
Uncharacterized protein {ECO:0000313|EMBL:KIA88778.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
transposase
scnpilot_solids2_trim150_scaffold_1086_3
unknown

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1455..1718
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1086_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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2699..2995
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZVC9_9BACT
helix-turn-helix domain protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_1086_5
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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3068..3550
DNA (483bp) protein (161aa)
S23 ribosomal protein id=2618939 bin=GWF2_Bacteroidetes_43_63 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
S23 ribosomal protein
Tax=GWF2_Bacteroidetes_43_63_curated
scnpilot_solids2_trim150_scaffold_1086_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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3578..5206
DNA (1629bp) protein (543aa)
Site-specific DNA-methyltransferase (Adenine-specific) id=4418988 bin=GWF2_Lentisphaerae_50_93 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DNA methylase N-4/N-6 domain-containing protein rbh
Tax=GWF2_Lentisphaerae_50_93_curated
scnpilot_solids2_trim150_scaffold_1086_7
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5181..5480
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG20 RepID=UPI0002D58CCE
Uncharacterized protein {ECO:0000313|EMBL:EYE87159.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
SEC-C motif domain-containing protein
scnpilot_solids2_trim150_scaffold_1086_8
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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5490..6335
DNA (846bp) protein (282aa)
DNA-damage-inducible protein D n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1I2_9BACT rbh
DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D rbh
Tax=CG_Anaero_03
scnpilot_solids2_trim150_scaffold_1086_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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6332..8848
DNA (2517bp) protein (839aa)
Uncharacterized protein id=4418989 bin=GWF2_Lentisphaerae_50_93 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein rbh
Tax=GWF2_Lentisphaerae_50_93_curated
scnpilot_solids2_trim150_scaffold_1086_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9246..9995
DNA (750bp) protein (250aa)
Transcriptional regulator, DeoR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE93_NIAKG
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEV97284.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1086_11
unknown

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10027..10137
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1086_12
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10134..13121
DNA (2988bp) protein (996aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037DC36A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADZ79382.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1086_13
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13168..14637
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003823A12 rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ79383.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1086_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14711..15925
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003814982
Uncharacterized protein {ECO:0000313|EMBL:KIC93299.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1086_15
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15948..18263
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ACEB5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ58826.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1086_16
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18287..19792
DNA (1506bp) protein (502aa)
Sodium/iodide co-transporter n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM39_9SPHI
Sodium/iodide co-transporter {ECO:0000313|EMBL:EOR92788.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Na+/solute symporter
Displaying 16 items

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