ggKbase home page

scnpilot_solids2_trim150_scaffold_1092

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1092_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153..965)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PG63_9ACTO
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) {ECO:0000313|EMBL:CEL12963.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
scnpilot_solids2_trim150_scaffold_1092_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(962..1900)
DNA (939bp) protein (313aa)
ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B2E320
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADV11785.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids2_trim150_scaffold_1092_3
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1928..3103)
DNA (1176bp) protein (392aa)
Extracellular solute-binding protein family 1 n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C6T4_STRBB
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADI08321.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
scnpilot_solids2_trim150_scaffold_1092_4
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3161..4399)
DNA (1239bp) protein (413aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00035F6E29 rbh
spermidine/putrescine ABC transporter ATP-binding subunit rbh
scnpilot_solids2_trim150_scaffold_1092_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4455..5780)
DNA (1326bp) protein (442aa)
aminotransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035FE7D0 rbh
Putative aminotransferase {ECO:0000313|EMBL:BAR60555.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
aminotransferase rbh
scnpilot_solids2_trim150_scaffold_1092_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6283..6870)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4H5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65638.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1092_7
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6875..7567)
DNA (693bp) protein (231aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NKJ5_KYTSD
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:ACV05481.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
scnpilot_solids2_trim150_scaffold_1092_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7564..8652)
DNA (1089bp) protein (363aa)
Putative ABC-type antimicrobial peptide transport system n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6T5_9ACTN rbh
Putative ABC-type antimicrobial peptide transport system {ECO:0000313|EMBL:CCM65636.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_1092_9
unknown

Not on your lists

9013..9438
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_10
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9441..10379
DNA (939bp) protein (313aa)
HNH endonuclease n=2 Tax=Anaerostipes RepID=E5VYM8_9FIRM
HNH endonuclease {ECO:0000313|EMBL:CDC34002.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
restriction endonuclease
scnpilot_solids2_trim150_scaffold_1092_11
Dermabacter hominis, Dermabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10649..11398)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UVT1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDS92782.1}; TaxID=1450519 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Dermabacter.;" source="Dermabacter hominis 1368.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1092_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11447..13609)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXN3_STRRD
Uncharacterized protein {ECO:0000313|EMBL:KHK96584.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1092_13
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13742..15469
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K138_ARTS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK05008.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_1092_14
unknown

Not on your lists

comp(15567..15830)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_15
unknown

Not on your lists

comp(15827..16228)
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_16
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(16435..16725)
DNA (291bp) protein (97aa)
XRE family transcriptional regulator n=1 Tax=Neisseria wadsworthii 9715 RepID=G4CS05_9NEIS
Helix-turn-helix protein {ECO:0000313|EMBL:KKS01666.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1092_17
unknown

Not on your lists

comp(16769..16993)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_18
unknown

Not on your lists

comp(17095..17907)
DNA (813bp) protein (271aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_19
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(17904..19235)
DNA (1332bp) protein (444aa)
Integrase family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZL49_9CLOT
integrase family protein; K14059 integrase
Tax=RBG_16_Zixibacteria_53_22_curated
scnpilot_solids2_trim150_scaffold_1092_20
unknown

Not on your lists

comp(19429..19740)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1092_21
unknown

Not on your lists

comp(19737..19916)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 21 items

View Taxonomy