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scnpilot_solids2_trim150_scaffold_1114

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1114_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..565
DNA (564bp) protein (188aa)
segregation and condensation protein A n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CBED9 rbh
condensin subunit ScpA; K05896 segregation and condensation protein A rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

546..1208
DNA (663bp) protein (221aa)
chromosome segregation protein ScpB n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C0ACC rbh
condensin subunit ScpB; K06024 segregation and condensation protein B rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1255..2100
DNA (846bp) protein (282aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
RNA pseudouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003822297 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_4
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2233..2640)
DNA (408bp) protein (136aa)
conjugal transfer protein TraR n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D4183
C4-type zinc finger DksA/TraR family protein
Conjugal transfer protein TraR {ECO:0000313|EMBL:KFI19075.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
scnpilot_solids2_trim150_scaffold_1114_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2881..3546)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037798DE rbh
CmpX protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3699..4820
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362E6C0 rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4817..5647
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CB3F4 rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5647..6438
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D46FD rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6431..7732
DNA (1302bp) protein (434aa)
Ni/Fe hydrogenase subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI0003640DB4 rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7729..8181
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E3C39
vhtD; hydrogenase expression/formation protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8188..9081)
DNA (894bp) protein (298aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD37E rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9102..10232)
DNA (1131bp) protein (377aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690}; Short=SDAP desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000255|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000255|HAMAP-Rule:MF_01690}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
succinyl-diaminopimelate desuccinylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000361B983 rbh
scnpilot_solids2_trim150_scaffold_1114_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10239..10586)
DNA (348bp) protein (116aa)
arsenate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B8342
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10668..12467
DNA (1800bp) protein (600aa)
ABC-type transport system ATPase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJD8_THIDA rbh
ABC-type transport system ATPase {ECO:0000313|EMBL:AAZ97226.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ABC-type transport system ATPase; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_1114_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12464..13750
DNA (1287bp) protein (429aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4E5E
putative integral membrane protein; K06902 MFS transporter, UMF1 family rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_1114_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13754..14194
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FAFAA
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1114_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14278..15243
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EE831 rbh
putative NAD/FAD-dependent oxidoreductase; K06955 rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1114_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15261..16145)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365B8FC rbh
diguanylate cyclase
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1114_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16202..17167)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378EA80 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1114_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17188..19506)
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364FFC1 rbh
signal transduction protein containing a membrane domain an EAL and a GGDEF domain rbh
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 20 items

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