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scnpilot_solids2_trim150_scaffold_1116

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1116_1
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(687..2258)
DNA (1572bp) protein (524aa)
Aspartate:proton symporter YveA n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XRD0_9PSED rbh
Aspartate:proton symporter {ECO:0000313|EMBL:KDP88412.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
yveA; aspartate:proton symporter YveA rbh
scnpilot_solids2_trim150_scaffold_1116_2
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(2414..5635)
DNA (3222bp) protein (1074aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE9_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL54885.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1116_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5837..7120)
DNA (1284bp) protein (428aa)
Oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ4_9GAMM
Oxidoreductase {ECO:0000313|EMBL:EIL92435.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
oxidoreductase oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_1116_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7113..7361)
DNA (249bp) protein (83aa)
Ferredoxin protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VXN5_9GAMM
Ferredoxin protein {ECO:0000313|EMBL:EIL91976.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sarcosine oxidase alpha subunit
scnpilot_solids2_trim150_scaffold_1116_5
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7358..8452)
DNA (1095bp) protein (365aa)
Putative fad dependent oxidoreductase oxidoreductase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UEC3_XANAP
fad dependent oxidoreductase oxidoreductase
Putative fad dependent oxidoreductase oxidoreductase protein {ECO:0000313|EMBL:CBA16451.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids2_trim150_scaffold_1116_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8449..9390)
DNA (942bp) protein (314aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4]
Proline racemase {ECO:0000313|EMBL:CCP39098.1}; EC=5.1.1.4 {ECO:0000313|EMBL:CCP39098.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hydroxyproline-2-epimerase n=1 Tax=Xanthomonas sacchari RepID=UPI00026309F2 rbh
scnpilot_solids2_trim150_scaffold_1116_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..10717
DNA (948bp) protein (316aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH9_9GAMM
MoxR-like ATPase {ECO:0000313|EMBL:EIL99970.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase
scnpilot_solids2_trim150_scaffold_1116_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10717..11670
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88586.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1116_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11667..13640
DNA (1974bp) protein (658aa)
Transglutaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLP6_9GAMM
transglutaminase-like enzyme, predicted cysteine protease
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:AGG88585.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1116_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13682..14278
DNA (597bp) protein (199aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP00_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL88941.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
starvation-inducible outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_1116_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14313..14657)
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKI3_9GAMM
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EIL99974.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids2_trim150_scaffold_1116_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..15260)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G0_9GAMM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA replication and repair protein RecR
scnpilot_solids2_trim150_scaffold_1116_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15343..15669)
DNA (327bp) protein (109aa)
Nucleoid-associated protein UU7_02777 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F9_9GAMM
Nucleoid-associated protein UU7_02777 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding protein, YbaB/EbfC family
scnpilot_solids2_trim150_scaffold_1116_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15666..17357)
DNA (1692bp) protein (564aa)
DNA polymerase III, subunit gamma/tau n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ1_9GAMM rbh
DNA polymerase III, subunit gamma/tau rbh
DNA polymerase III, subunit gamma/tau {ECO:0000313|EMBL:AGG88580.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1116_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17546..19450)
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDE25
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 15 items

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