ggKbase home page

scnpilot_solids2_trim150_scaffold_1127

Search features with annotation key words

Displaying items 31-50 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1127_31
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36407..36667)
DNA (261bp) protein (87aa)
Transposase, IS4 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZL6_POLSJ
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABE47276.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids2_trim150_scaffold_1127_32
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37090..37473
DNA (384bp) protein (128aa)
Putative copper resistance protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNF7_PSEUP
putative copper resistance protein; K07156
Putative copper resistance protein {ECO:0000313|EMBL:AER55388.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_1127_33
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37717..38877
DNA (1161bp) protein (387aa)
Putative transmembrane transporter protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNF6_PSEUP
putative transmembrane transporter protein; K07245 putative copper resistance protein D
Putative transmembrane transporter protein {ECO:0000313|EMBL:AER55387.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_1127_34
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38701..39213)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=A9C315_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44605.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids2_trim150_scaffold_1127_35
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39213..39530)
DNA (318bp) protein (106aa)
Transcriptional regulator, AbrB family n=4 Tax=Proteobacteria RepID=A9C316_DELAS
suppressor protein
Probable suppressor protein {ECO:0000313|EMBL:CAP44604.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids2_trim150_scaffold_1127_36
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39843..41627
DNA (1785bp) protein (595aa)
Relaxase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNV6_PSEUP rbh
Relaxase rbh
Relaxase {ECO:0000313|EMBL:AER55457.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_1127_37
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42057..42713
DNA (657bp) protein (219aa)
Regulatory protein, LysR-family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5I9_AROAE
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21749.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
reg2; LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1127_38
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42595..44511)
DNA (1917bp) protein (639aa)
Integrase family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNF2_PSEUP rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AER55383.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_1127_trna_1
unknown

Not on your lists

comp(44738..44808)
DNA (71bp)
transferRNA Gly
scnpilot_solids2_trim150_scaffold_1127_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45003..47210
DNA (2208bp) protein (736aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Rhodanobacter denitrificans RepID=M4NJW0_9GAMM
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AGG90377.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1127_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47220..48062
DNA (843bp) protein (281aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB9_9GAMM
scnpilot_solids2_trim150_scaffold_1127_41
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48418..50259
DNA (1842bp) protein (614aa)
Di-and tricarboxylate transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB7_9GAMM
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EIL91158.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
di-/tricarboxylate transporter
scnpilot_solids2_trim150_scaffold_1127_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50288..50659)
DNA (372bp) protein (124aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W277_9GAMM
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:EIL93568.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
scnpilot_solids2_trim150_scaffold_1127_43
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50737..51015
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1127_44
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51079..53511
DNA (2433bp) protein (811aa)
Short chain fatty acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU5_9GAMM rbh
short chain fatty acids transporter rbh
Short chain fatty acids transporter {ECO:0000313|EMBL:AGG90385.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1127_45
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53553..54191)
DNA (639bp) protein (213aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI0002FF6C39
Membrane protein {ECO:0000313|EMBL:AHX15848.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC-type transport system, involved in lipoprotein release, permease component
scnpilot_solids2_trim150_scaffold_1127_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54317..55003
DNA (687bp) protein (229aa)
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT48_9GAMM
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EIM02640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
scnpilot_solids2_trim150_scaffold_1127_47
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55086..55499
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W286_9GAMM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
large conductance mechanosensitive channel protein
scnpilot_solids2_trim150_scaffold_1127_48
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55606..57042
DNA (1437bp) protein (479aa)
Peptidase M28 n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV2_9GAMM
Aminopeptidase {ECO:0000313|EMBL:EIL90044.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative aminopeptidase
scnpilot_solids2_trim150_scaffold_1127_49
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57083..60085)
DNA (3003bp) protein (1001aa)
multidrug transporter n=1 Tax=Dyella japonica RepID=UPI000366E84F rbh
Acriflavine resistance protein B {ECO:0000313|EMBL:AHX15841.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cation/multidrug efflux pump
Displaying items 31-50 of 50 in total

View Taxonomy