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scnpilot_solids2_trim150_scaffold_1130

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1130_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..200
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00037DFEDE
Iron transporter {ECO:0000313|EMBL:EXF95826.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
natural resistance-associated macrophage protein
scnpilot_solids2_trim150_scaffold_1130_2
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136..1692)
DNA (1557bp) protein (519aa)
UPI0003CDF88C related cluster n=1 Tax=unknown RepID=UPI0003CDF88C
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ESY68591.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
aminoglycoside phosphotransferase
scnpilot_solids2_trim150_scaffold_1130_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1768..2844)
DNA (1077bp) protein (359aa)
NADP-dependent alcohol dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00036DC10D rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KGE80437.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
zinc-binding alcohol dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1130_4
unknown

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comp(2973..3347)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1130_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3462..4391)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3E9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52479.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
periplasmic nitrate reductase
scnpilot_solids2_trim150_scaffold_1130_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4433..5563)
DNA (1131bp) protein (377aa)
nirK2; dissimilatory nitrite reductase (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] rbh
Dissimilatory nitrite reductase {ECO:0000313|EMBL:CAE29586.1}; EC=1.7.99.3 {ECO:0000313|EMBL:CAE29586.1};; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
nitrite reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313BE29 rbh
scnpilot_solids2_trim150_scaffold_1130_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5813..6559
DNA (747bp) protein (249aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J0D5_RHOP2
signal-transduction protein
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ABD06075.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
scnpilot_solids2_trim150_scaffold_1130_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6642..7088
DNA (447bp) protein (149aa)
Universal stress protein n=3 Tax=Rhodobacter RepID=F3U529_RHOSH
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
universal stress protein
scnpilot_solids2_trim150_scaffold_1130_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7188..7883)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ71_XANP2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS70167.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_1130_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8096..8533
DNA (438bp) protein (146aa)
UspA domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7R3_STAND
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADH88511.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_1130_11
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8664..10532)
DNA (1869bp) protein (623aa)
Cadmium, zinc and cobalt-transporting ATPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D957_9RHIZ rbh
Haloacid dehalogenase {ECO:0000313|EMBL:KKC32777.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
heavy metal translocating P-type ATPase rbh
scnpilot_solids2_trim150_scaffold_1130_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10832..13570
DNA (2739bp) protein (913aa)
Acyl-CoA synthetase (NDP forming) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUX6_9RHIZ rbh
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:EIM27768.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
CoA-binding protein; K09181 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1130_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13609..16269
DNA (2661bp) protein (887aa)
Cation-transporting ATPase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3N0_9RHIZ rbh
Cation-transporting ATPase rbh
Cation-transporting ATPase {ECO:0000313|EMBL:AGK56812.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_1130_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16382..16549
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY36_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG69700.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
scnpilot_solids2_trim150_scaffold_1130_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16588..17784
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] rbh
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037DDD00 rbh
scnpilot_solids2_trim150_scaffold_1130_16
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17854..19332
DNA (1479bp) protein (493aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
phosphoketolase (EC:4.1.2.9); K01621 phosphoketolase [EC:4.1.2.9]
phosphoketolase n=1 Tax=Methyloferula stellata RepID=UPI00037359EF
Displaying 16 items

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