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scnpilot_solids2_trim150_scaffold_1135

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1135_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..663
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B49082
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1135_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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711..3521
DNA (2811bp) protein (937aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E689_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1135_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4130..6475
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B7A5B1 rbh
X-Pro dipeptidyl-peptidase domain-containing protein
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ADP82375.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids2_trim150_scaffold_1135_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6519..9416
DNA (2898bp) protein (966aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B49082
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1135_5
Corynebacterium marinum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9476..10504
DNA (1029bp) protein (343aa)
Glycosyl transferase family 2 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7M7_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AJK67897.1}; TaxID=1224162 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium marinum DSM 44953.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_1135_6

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10997..11473
DNA (477bp) protein (159aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Patulibacter americanus RepID=UPI0003B78772
Uncharacterized protein {ECO:0000313|EMBL:KKK51130.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome C biogenesis protein CcmE-like protein; K02197 cytochrome c-type biogenesis protein CcmE
scnpilot_solids2_trim150_scaffold_1135_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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11466..14081
DNA (2616bp) protein (872aa)
Cytochrome c assembly protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7Z7_CONWI
cytochrome C assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c assembly protein {ECO:0000313|EMBL:ADB52891.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1135_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14109..14333
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E871_9ACTN
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ADB52889.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1135_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14340..14741
DNA (402bp) protein (134aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZK1_CONWI
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB53839.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1135_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14929..16179
DNA (1251bp) protein (417aa)
Alkane 1-monooxygenase (EC:1.14.15.3); K00496 alkane 1-monooxygenase [EC:1.14.15.3] rbh
Alkane 1-monooxygenase {ECO:0000313|EMBL:ADB54140.1}; EC=1.14.15.3 {ECO:0000313|EMBL:ADB54140.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alkane 1-monooxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V9_CONWI rbh
scnpilot_solids2_trim150_scaffold_1135_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16176..16349
DNA (174bp) protein (58aa)
Rubredoxin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V8_CONWI
rubredoxin-type Fe(Cys)4 protein
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1135_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16484..16978
DNA (495bp) protein (165aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V7_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB54138.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1135_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16975..17460
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphodiesterase, MJ0936 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ9_CONWI
phosphodiesterase, MJ0936 family; K07095
scnpilot_solids2_trim150_scaffold_1135_14
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17498..18127)
DNA (630bp) protein (210aa)
Putative TetR-family transcriptional regulator n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82RJ2_STRAW
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC63166.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1135_15
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

18240..19082
DNA (843bp) protein (281aa)
C-5 sterol desaturase n=1 Tax=Patulibacter medicamentivorans RepID=H0E8F2_9ACTN rbh
C-5 sterol desaturase {ECO:0000313|EMBL:AKH17869.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
hypothetical protein rbh
Displaying 15 items

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