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scnpilot_solids2_trim150_scaffold_1160

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1160_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8..466)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR65_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL89706.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1160_2
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(776..2266)
DNA (1491bp) protein (497aa)
NERD nuclease n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0K5_9DELT
NERD nuclease {ECO:0000313|EMBL:KJS30244.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
NERD domain-containing protein
scnpilot_solids2_trim150_scaffold_1160_3
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2374..3957)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J6E1_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS30245.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1160_4
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3961..5148)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S7Q8_PROA2
Uncharacterized protein {ECO:0000313|EMBL:KJS30246.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1160_5
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5145..6965)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IKV6_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ10677.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1160_6
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6969..10187)
DNA (3219bp) protein (1073aa)
Helicase n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J4V6_9DELT
Helicase {ECO:0000313|EMBL:ESQ10676.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncultured Desulfofustis sp. PB-SRB1.;"
helicase domain-containing protein
scnpilot_solids2_trim150_scaffold_1160_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10671..12653
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ47_9GAMM
scnpilot_solids2_trim150_scaffold_1160_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12810..13841)
DNA (1032bp) protein (344aa)
Putative permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM3_9GAMM
Putative permease {ECO:0000313|EMBL:EIL97214.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease
scnpilot_solids2_trim150_scaffold_1160_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14130..16721
DNA (2592bp) protein (864aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR10_9GAMM
scnpilot_solids2_trim150_scaffold_1160_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16811..17278)
DNA (468bp) protein (156aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=T5U4M4_ECOLX
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ETX64359.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
scnpilot_solids2_trim150_scaffold_1160_11
unknown

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comp(17278..17469)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1160_12
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17484..18002)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035FD126
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EEG08650.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
putative lyase
scnpilot_solids2_trim150_scaffold_1160_13
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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18420..18659
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GM62_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AJD46660.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
hypothetical protein; K07746 hypothetical protein
scnpilot_solids2_trim150_scaffold_1160_14

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18656..18850
DNA (195bp) protein (65aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BHQ1_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48309.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 14 items

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