ggKbase home page

scnpilot_solids2_trim150_scaffold_1161

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1161_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
serine hydroxymethyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000375AEDA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1161_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(294..1406)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365E11E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52314.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_1161_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1848..2216
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC44_9SPHI
Response regulator receiver protein {ECO:0000313|EMBL:EHQ29607.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
response regulator receiver
scnpilot_solids2_trim150_scaffold_1161_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2398..3828
DNA (1431bp) protein (477aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ6_NIAKG
Metallo-beta-lactamase {ECO:0000313|EMBL:KIC89277.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
scnpilot_solids2_trim150_scaffold_1161_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4622..5218)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CD021
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03523.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1161_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5256..5891)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1161_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6171..7274
DNA (1104bp) protein (368aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9U2_NIAKG
scnpilot_solids2_trim150_scaffold_1161_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7340..8080
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668E87
Uncharacterized protein {ECO:0000313|EMBL:GAO41235.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1161_9
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

8106..9788
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376F6EB
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_1161_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9790..10989)
DNA (1200bp) protein (400aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D7EF4 rbh
Fmu (Sun) domain protein {ECO:0000313|EMBL:AEW01283.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1161_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11115..12365)
DNA (1251bp) protein (417aa)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ02_CHIPD
scnpilot_solids2_trim150_scaffold_1161_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12505..14064)
DNA (1560bp) protein (520aa)
chemotaxis protein CheY n=1 Tax=Segetibacter koreensis RepID=UPI0003740966 rbh
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC92864.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_1161_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14174..15385
DNA (1212bp) protein (404aa)
Metal dependent phosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP65_NIAKG
metal dependent phosphohydrolase; K06885
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEW03183.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1161_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15419..16471
DNA (1053bp) protein (351aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG
scnpilot_solids2_trim150_scaffold_1161_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16562..17983
DNA (1422bp) protein (474aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003732E0F rbh
scnpilot_solids2_trim150_scaffold_1161_16
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17985..18782
DNA (798bp) protein (266aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWQ5_EMTOG
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase
Displaying 16 items

View Taxonomy