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scnpilot_solids2_trim150_scaffold_1175

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1175_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..483
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH0_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1175_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592..1941
DNA (1350bp) protein (450aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetate CoA-transferase YdiF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH1_9GAMM
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
scnpilot_solids2_trim150_scaffold_1175_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2024..3067)
DNA (1044bp) protein (348aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH2_9GAMM
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92613.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_1175_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3086..3817)
DNA (732bp) protein (244aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ11_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88044.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1175_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3874..4533)
DNA (660bp) protein (220aa)
Acyl-CoA thioesterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ12_9GAMM
Acyl-CoA thioesterase {ECO:0000313|EMBL:EIL92615.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lysophospholipase L1-like esterase
scnpilot_solids2_trim150_scaffold_1175_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4550..5230
DNA (681bp) protein (227aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N9_9GAMM
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component {ECO:0000313|EMBL:EIL95830.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
scnpilot_solids2_trim150_scaffold_1175_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5233..7710
DNA (2478bp) protein (826aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ14_9GAMM
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:AGG88041.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
scnpilot_solids2_trim150_scaffold_1175_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7826..8350
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92619.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1175_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8523..9302)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBQ7_9GAMM
Protein of unknown function (DUF2807)
Uncharacterized protein {ECO:0000313|EMBL:AGG88039.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1175_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9551..10003)
DNA (453bp) protein (151aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EIL91095.1}; EC=3.6.1.19 {ECO:0000313|EMBL:EIL91095.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV54_9GAMM
MazG family protein
scnpilot_solids2_trim150_scaffold_1175_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10000..10812)
DNA (813bp) protein (271aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZI0_9GAMM
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EIL92621.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1175_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10809..11366)
DNA (558bp) protein (186aa)
Adenosine nucleotide hydrolase NudE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV56_9GAMM
ADP-ribose diphosphatase {ECO:0000313|EMBL:GAN45280.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ADP-ribose pyrophosphatase
scnpilot_solids2_trim150_scaffold_1175_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11376..12290)
DNA (915bp) protein (305aa)
Type II secretion system protein N (GspN) n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ22_9GAMM
type II secretion system protein N (GspN)
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:AGG88033.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1175_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12346..12681)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030907A4
Uncharacterized protein {ECO:0000313|EMBL:AIF47208.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1175_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12876..13610
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9X9_9GAMM
RNA methyltransferase, RsmE family
scnpilot_solids2_trim150_scaffold_1175_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13607..14086)
DNA (480bp) protein (160aa)
Chemotaxis-related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ26_9GAMM
chemotaxis signal transduction protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1175_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14083..16092)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003728CC3
Uncharacterized protein {ECO:0000313|EMBL:AIF47205.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
scnpilot_solids2_trim150_scaffold_1175_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16085..21826)
DNA (5742bp) protein (1914aa)
Chemotaxis protein cheA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZI8_9GAMM
Chemotaxis protein cheA {ECO:0000313|EMBL:EIL92629.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
chemotaxis protein histidine kinase-like protein
scnpilot_solids2_trim150_scaffold_1175_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21912..23351)
DNA (1440bp) protein (480aa)
Pilus biogenesis protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJT5_9GAMM
Pilus biogenesis protein {ECO:0000313|EMBL:EIL99726.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methyl-accepting chemotaxis protein
Displaying 19 items

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