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scnpilot_solids2_trim150_scaffold_1179

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1179_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..622)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W210_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93501.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1179_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(612..1526)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W211_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93502.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1179_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1548..2567)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W212_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93503.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1179_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2567..4147)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W213_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93504.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1179_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4265..4549)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W214_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93505.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1179_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4914..5918
DNA (1005bp) protein (335aa)
OmpA family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W215_9GAMM rbh
OmpA family protein {ECO:0000313|EMBL:EIL93506.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
OmpA family protein rbh
scnpilot_solids2_trim150_scaffold_1179_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5974..6600)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W216_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93507.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1179_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6660..6986)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W217_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93508.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1179_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7109..7684
DNA (576bp) protein (192aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W218_9GAMM rbh
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL93509.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_1179_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7681..8160
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W219_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93510.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1179_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8165..8965)
DNA (801bp) protein (267aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W220_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1179_12
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9200..9772
DNA (573bp) protein (191aa)
LemA family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603K7_METCA
LemA family protein; K03744 LemA protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
scnpilot_solids2_trim150_scaffold_1179_13
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9834..10721
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A66CA
Uncharacterized protein {ECO:0000313|EMBL:AHK77867.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
E3 Ubiquitin ligase
scnpilot_solids2_trim150_scaffold_1179_14
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10889..11491
DNA (603bp) protein (201aa)
LemA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U802_9GAMM
LemA family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_1179_15
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11493..13481
DNA (1989bp) protein (663aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH22379.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Putative transmembrane signal peptide protein id=4909413 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative transmembrane signal peptide protein
scnpilot_solids2_trim150_scaffold_1179_16
unknown

Not on your lists

comp(13809..14138)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1179_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15126..16478)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W221_9GAMM rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_1179_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16475..17176)
DNA (702bp) protein (234aa)
AbfR arabinofuranosidase two component system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W222_9GAMM rbh
AbfR arabinofuranosidase two component system response regulator {ECO:0000313|EMBL:EIL93513.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR
scnpilot_solids2_trim150_scaffold_1179_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17310..17813
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W223_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93514.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K06006 periplasmic protein CpxP
scnpilot_solids2_trim150_scaffold_1179_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17981..18667)
DNA (687bp) protein (229aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W224_9GAMM
Displaying 20 items

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