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scnpilot_solids2_trim150_scaffold_1195

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1195_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3..1226)
DNA (1224bp) protein (408aa)
Integrase family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F465_CONWI rbh
integrase rbh
Integrase family protein {ECO:0000313|EMBL:ADB50437.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1195_2
unknown

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comp(1219..1476)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_3
unknown

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comp(1563..2009)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_4
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2006..3148)
DNA (1143bp) protein (381aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=910996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei ATCC 13337.;"
DNA methylase n=1 Tax=Mycobacterium phage Bruin RepID=V5R7M2_9CAUD
site-specific DNA methyltransferase
scnpilot_solids2_trim150_scaffold_1195_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3145..4053)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5Y8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10908.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1195_6
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4050..6731)
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00036CFEEC
ATP-binding protein {ECO:0000313|EMBL:AJK56495.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
putative ATP/GTP-binding protein
scnpilot_solids2_trim150_scaffold_1195_7

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comp(6728..7486)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00037DB75B
Uncharacterized protein {ECO:0000313|EMBL:KKN81414.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_1195_8
unknown

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comp(7483..8154)
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_9

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comp(8138..9187)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00037DB75B
Uncharacterized protein {ECO:0000313|EMBL:KKN81071.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1195_10
unknown

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comp(9188..9682)
DNA (495bp) protein (165aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9679..10908)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E452_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11541.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_1195_12
unknown

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comp(10905..13571)
DNA (2667bp) protein (889aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(13568..16144)
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYZ9_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49873.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1195_14
unknown

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comp(16141..16848)
DNA (708bp) protein (236aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1195_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17121..18335
DNA (1215bp) protein (405aa)
Transposase id=3713085 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium sp. STM 4661 genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Transposase {ECO:0000313|EMBL:CCV10615.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transposase IS111A/IS1328/IS1533 rbh
scnpilot_solids2_trim150_scaffold_1195_16
unknown

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comp(18347..18475)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 16 items

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