ggKbase home page

scnpilot_solids2_trim150_scaffold_1201

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1201_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..508)
DNA (507bp) protein (169aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE21_9GAMM
Sulfotransferase {ECO:0000313|EMBL:AHX14709.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_1201_2
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(525..1088)
DNA (564bp) protein (188aa)
Prolyl 4-hydroxylase subunit alpha n=1 Tax=Alteromonas macleodii (strain English Channel 673) RepID=K0CN14_ALTME
prolyl 4-hydroxylase subunit alpha
Prolyl 4-hydroxylase subunit alpha {ECO:0000313|EMBL:AFT73755.1}; TaxID=1004788 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (strain English Channel 673).;"
scnpilot_solids2_trim150_scaffold_1201_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1412..2356
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90594.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EDD domain protein, DegV family
scnpilot_solids2_trim150_scaffold_1201_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2441..5515)
DNA (3075bp) protein (1025aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK2_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL98243.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_1201_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..6784)
DNA (783bp) protein (261aa)
Tropinone reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE26_9GAMM
Tropinone reductase {ECO:0000313|EMBL:EIL97717.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_1201_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7060..7512
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02988.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1201_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7681..7971
DNA (291bp) protein (97aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA8_9GAMM
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EIL92549.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1201_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..8744
DNA (777bp) protein (259aa)
Lipoate--protein ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZA9_9GAMM
Lipoate--protein ligase {ECO:0000313|EMBL:EIL92550.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lipoate-protein ligase A
scnpilot_solids2_trim150_scaffold_1201_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8760..9308)
DNA (549bp) protein (183aa)
Putative 7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZB1_9GAMM
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:KGI77822.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Zn-finger containing NTP pyrophosphohydrolase
scnpilot_solids2_trim150_scaffold_1201_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9418..10176
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYR9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative periplasmic protein
scnpilot_solids2_trim150_scaffold_1201_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10173..12584
DNA (2412bp) protein (804aa)
Penicillin amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYR8_9GAMM
Penicilin amidase {ECO:0000313|EMBL:AGG89846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
penicilin amidase
scnpilot_solids2_trim150_scaffold_1201_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12714..13043
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94009.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1201_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..14298)
DNA (1152bp) protein (384aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NQI0_9GAMM
scnpilot_solids2_trim150_scaffold_1201_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14359..15423)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1201_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15652..16017)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZC5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92566.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator, Spx/MgsR family
scnpilot_solids2_trim150_scaffold_1201_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16139..16966)
DNA (828bp) protein (276aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H1_9GAMM
scnpilot_solids2_trim150_scaffold_1201_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17239..18414
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN3_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AHG92472.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 17 items

View Taxonomy