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scnpilot_solids2_trim150_scaffold_1304

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1304_1
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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195..1085
DNA (891bp) protein (297aa)
Hpf1p {ECO:0000313|EMBL:AJU00143.1}; TaxID=1294358 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Saccharomyces cerevisiae YJM1386.;"
scnpilot_solids2_trim150_scaffold_1304_2
unknown

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1111..1341
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_3
unknown

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1385..2851
DNA (1467bp) protein (489aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_4
unknown

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comp(2992..3612)
DNA (621bp) protein (207aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_5
unknown

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3866..4240
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_6
unknown

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4454..5383
DNA (930bp) protein (310aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_7
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5546..6841)
DNA (1296bp) protein (432aa)
Histidine kinase n=1 Tax=Brevibacterium casei S18 RepID=K9AMG4_9MICO rbh
Histidine kinase {ECO:0000313|EMBL:EKU48474.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
histidine kinase
scnpilot_solids2_trim150_scaffold_1304_8
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6964..7578)
DNA (615bp) protein (205aa)
Histidine kinase n=1 Tax=Brevibacterium casei S18 RepID=K9AMG4_9MICO
Histidine kinase {ECO:0000313|EMBL:EKU48474.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
histidine kinase
scnpilot_solids2_trim150_scaffold_1304_9
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7731..8393
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VH19_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC81529.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
scnpilot_solids2_trim150_scaffold_1304_10
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8421..9452
DNA (1032bp) protein (344aa)
Putative Xre family DNA-binding protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3VC76_9ACTO rbh
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAC81528.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1304_11
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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9619..11193
DNA (1575bp) protein (525aa)
Putative type I restriction enzymeP M protein {ECO:0000313|EMBL:KFB76681.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFB76681.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
type i restriction-modification system, m subunit (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI0002DCDA78 rbh
scnpilot_solids2_trim150_scaffold_1304_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11190..11711
DNA (522bp) protein (174aa)
ATP-dependent Clp protease, ATP-binding subunit n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P7K3_LEIXC
ATP-dependent Clp protease, ATP-binding subunit
Uncharacterized protein {ECO:0000313|EMBL:AGW41429.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids2_trim150_scaffold_1304_13
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11708..12943
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI0003665336 rbh
type I restriction modification DNA specificity domain protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids2_trim150_scaffold_1304_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12940..16035
DNA (3096bp) protein (1032aa)
type i site-specific deoxyribonuclease, hsdr family (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
DEAD/DEAH box helicase n=1 Tax=Salinispora pacifica RepID=UPI00036D04F9 rbh
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EXG79853.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
scnpilot_solids2_trim150_scaffold_1304_15
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16035..16808
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5U6M8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:AKE89612.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1304_16
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16798..17961
DNA (1164bp) protein (388aa)
S14 family endopeptidase ClpA n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EH58_9ACTO rbh
S14 family endopeptidase ClpA {ECO:0000313|EMBL:EGQ73229.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
ATPase AAA rbh
scnpilot_solids2_trim150_scaffold_1304_17
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17958..19817
DNA (1860bp) protein (620aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Kocuria palustris PEL RepID=M2YDP7_9MICC rbh
ATP-dependent endonuclease of the OLD family-like protein {ECO:0000313|EMBL:EME36675.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
ATP-dependent OLD family endonuclease; K07459 putative ATP-dependent endonuclease of the OLD family rbh
scnpilot_solids2_trim150_scaffold_1304_18
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19824..21521
DNA (1698bp) protein (566aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
Putative ATP-dependent DNA helicase n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QGP4_9ACTO rbh
scnpilot_solids2_trim150_scaffold_1304_19
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21608..22915)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B73676
LigA protein {ECO:0000313|EMBL:EWM64135.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1304_20
unknown

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comp(22979..23212)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1304_21
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23209..23646)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036AE286
Uncharacterized protein {ECO:0000313|EMBL:EHR48479.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1304_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23889..24221
DNA (333bp) protein (111aa)
cytochrome C oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACV78077.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACV78077.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cytochrome c oxidase, subunit I n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFW6_NAKMY
Displaying 22 items

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