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scnpilot_solids2_trim150_scaffold_1320

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1320_1
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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1..867
DNA (867bp) protein (289aa)
Tax=GWF2_Lentisphaerae_44_16_curated
scnpilot_solids2_trim150_scaffold_1320_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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1077..3176
DNA (2100bp) protein (700aa)
id=1872742 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_1320_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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3218..4210
DNA (993bp) protein (331aa)
id=1872745 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_1320_4
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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4304..5926
DNA (1623bp) protein (541aa)
Sodium-glucose/galactose cotransporter id=3759142 bin=GWF2_Planctomycetes_42_9 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Na+/glucose cotransporter; K03307 solute:Na+ symporter, SSS family
Tax=RBG_16_Planctomycetes_64_10_curated
scnpilot_solids2_trim150_scaffold_1320_5
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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5952..6737
DNA (786bp) protein (262aa)
Hypothetical conserved protein id=3406686 bin=GWF2_Planctomycetes_42_9 species=uncultured planctomycete genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
LmbE family protein
Tax=GWF2_Planctomycetes_42_9_curated
scnpilot_solids2_trim150_scaffold_1320_6
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6734..7636
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360C659 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU59617.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
scnpilot_solids2_trim150_scaffold_1320_7
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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7637..8389
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DB85D rbh
putative oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:BAJ64609.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
scnpilot_solids2_trim150_scaffold_1320_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8657..9832
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360AD5C rbh
mandelate racemase/muconate lactonizing protein rbh
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:ABQ89754.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
scnpilot_solids2_trim150_scaffold_1320_9
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9854..10615
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003725FC5 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHM61152.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids2_trim150_scaffold_1320_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10646..11776)
DNA (1131bp) protein (377aa)
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:EOR95771.1}; EC=1.6.1.2 {ECO:0000313|EMBL:EOR95771.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] rbh
NAD(P) transhydrogenase alpha subunit n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GVL5_9SPHI rbh
scnpilot_solids2_trim150_scaffold_1320_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11992..14673
DNA (2682bp) protein (894aa)
4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase {ECO:0000313|EMBL:AEV98902.1}; EC=2.4.1.25 {ECO:0000313|EMBL:AEV98902.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
4-alpha-glucanotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR9_NIAKG
scnpilot_solids2_trim150_scaffold_1320_12
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14863..15507
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A153D
Uncharacterized protein {ECO:0000313|EMBL:GAO31439.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1320_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15622..16638
DNA (1017bp) protein (339aa)
Muconate cycloisomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPR8_NIAKG
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KIC93818.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Muconate cycloisomerase
scnpilot_solids2_trim150_scaffold_1320_14
unknown

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16774..16977
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 14 items

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