ggKbase home page

scnpilot_solids2_trim150_scaffold_1343

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1343_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..590
DNA (588bp) protein (196aa)
Outer membrane efflux protein id=1332411 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane efflux protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1343_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

623..1852
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1343_3
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1863..4949
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS rbh
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
Tax=GWA2_Gallionellales_54_124_curated
scnpilot_solids2_trim150_scaffold_1343_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5006..5344
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=1341260 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrogen regulatory protein P-II
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1343_5
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5443..5748
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI7_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL54963.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
scnpilot_solids2_trim150_scaffold_1343_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5798..8131
DNA (2334bp) protein (778aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_1343_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8153..9556)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F919A
regulatory protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1343_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9553..10368)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003767671 rbh
hypothetical protein; K07243 high-affinity iron transporter
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_1343_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10381..10740)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036645A1
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_solids2_trim150_scaffold_1343_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10759..12300)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361F38B
carbohydrate-selective porin
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_solids2_trim150_scaffold_1343_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12321..12866)
DNA (546bp) protein (182aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003732F3D
hypothetical protein; K07230
Uncharacterized protein {ECO:0000313|EMBL:AAZ45869.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids2_trim150_scaffold_1343_12
unknown

Not on your lists

comp(13398..13661)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1343_13
unknown

Not on your lists

comp(13679..14035)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1343_14

Not on your lists

14676..14900
DNA (225bp) protein (75aa)
Phage transcriptional regulator, AlpA n=1 Tax=mine drainage metagenome RepID=E6PRZ6_9ZZZZ
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative phage transcriptional regulator; K07733 prophage regulatory protein
scnpilot_solids2_trim150_scaffold_1343_15

Not on your lists

comp(14878..16134)
DNA (1257bp) protein (419aa)
phage integrase family protein id=12498573 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria rbh
Integrase {ECO:0000313|EMBL:CBH97703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phage integrase family protein
scnpilot_solids2_trim150_scaffold_1343_16
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16431..16763)
DNA (333bp) protein (111aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=12495415 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium hominis ATCC 15826.;"
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
Displaying 16 items

View Taxonomy