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scnpilot_solids2_trim150_scaffold_1374

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1374_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..852)
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E6_9GAMM rbh
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIL92937.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1374_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(849..3131)
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92938.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1631)
scnpilot_solids2_trim150_scaffold_1374_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3254..3589)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037EA558
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1374_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3603..4091
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spat
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E9_9GAMM rbh
5-(carboxyamino)imidazole ribonucleotide mutase
scnpilot_solids2_trim150_scaffold_1374_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4088..5245
DNA (1158bp) protein (386aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F0_9GAMM rbh
5-(carboxyamino)imidazole ribonucleotide synthase
scnpilot_solids2_trim150_scaffold_1374_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5491..6993
DNA (1503bp) protein (501aa)
Inorganic anion transporter, SulP family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F1_9GAMM rbh
Inorganic anion transporter, SulP family protein {ECO:0000313|EMBL:EIL92942.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
inorganic anion transporter, SulP family rbh
scnpilot_solids2_trim150_scaffold_1374_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..7645)
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Superoxide dismutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F2_9GAMM rbh
superoxide dismutase rbh
scnpilot_solids2_trim150_scaffold_1374_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7757..8080
DNA (324bp) protein (108aa)
Glutaredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F3_9GAMM
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
monothiol glutaredoxin, Grx4 family
scnpilot_solids2_trim150_scaffold_1374_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8083..8847
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F4_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL92945.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_1374_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..9517
DNA (612bp) protein (204aa)
Membrane protein, MarC family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F5_9GAMM rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multiple antibiotic transporter
scnpilot_solids2_trim150_scaffold_1374_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9986..13285
DNA (3300bp) protein (1100aa)
Oar protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F6_9GAMM rbh
Oar protein {ECO:0000313|EMBL:EIL92947.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1374_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13415..14815
DNA (1401bp) protein (467aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F7_9GAMM rbh
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:EIL92948.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Rossmann fold nucleotide-binding protein
scnpilot_solids2_trim150_scaffold_1374_trna_1
unknown

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14887..14960
DNA (74bp)
transferRNA Asn
scnpilot_solids2_trim150_scaffold_1374_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15177..15938
DNA (762bp) protein (254aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F8_9GAMM rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL92949.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cAMP-binding protein
scnpilot_solids2_trim150_scaffold_1374_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16063..16452
DNA (390bp) protein (130aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28551.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28551.1};; Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:AGG89997.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Copper-containing nitrite reductase n=2 Tax=Rhodanobacter RepID=D5JAK6_9GAMM
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
Displaying 15 items

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