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scnpilot_solids2_trim150_scaffold_1399

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1399_1
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..611)
DNA (609bp) protein (203aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
Transcription termination factor Rho n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6LAA8_SAPGL
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
scnpilot_solids2_trim150_scaffold_1399_2
unknown

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comp(896..1702)
DNA (807bp) protein (269aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_3
unknown

Not on your lists

comp(1788..2102)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_4
unknown

Not on your lists

comp(2102..2449)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2548..3636
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000374EBA9
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AEE52102.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_1399_6
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3757..4284)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00037F8CB4
Azurin {ECO:0000313|EMBL:CEN48599.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
azurin
scnpilot_solids2_trim150_scaffold_1399_7
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4345..5076)
DNA (732bp) protein (244aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD3_LEAB4 rbh
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling rbh
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADQ16119.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_1399_8
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(5095..5865)
DNA (771bp) protein (257aa)
Putative RNA methylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTB3_AEQSU
Methyltransferase domain protein {ECO:0000313|EMBL:EPB65864.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
putative RNA methylase
scnpilot_solids2_trim150_scaffold_1399_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5882..6787)
DNA (906bp) protein (302aa)
tryptophan 23-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
Tryptophan 23-dioxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9I2_FLUTR
Tryptophan 23-dioxygenase {ECO:0000313|EMBL:AEA45163.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_1399_10
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6784..7224)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD2_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16118.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_1399_11
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7251..7712)
DNA (462bp) protein (154aa)
Rrf2 family protein, putative transcriptional regulator n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZYP3_ORNRL
Rrf2 family transcriptional regulator
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:AFL96827.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
scnpilot_solids2_trim150_scaffold_1399_12
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8028..9695
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1Q9_9BACT
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_1399_13
unknown

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9692..11311
DNA (1620bp) protein (540aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_14
unknown

Not on your lists

11308..11796
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_15
unknown

Not on your lists

11777..12505
DNA (729bp) protein (243aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_16
unknown

Not on your lists

12502..12981
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_17
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12962..13138
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJW9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK58571.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
scnpilot_solids2_trim150_scaffold_1399_18
unknown

Not on your lists

13145..13606
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_19
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13603..15018
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS70_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16722.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_1399_20
unknown

Not on your lists

15027..15473
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_21
unknown

Not on your lists

15587..16009
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1399_22
unknown

Not on your lists

16024..16164
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 22 items

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