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scnpilot_solids2_trim150_scaffold_1402

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1402_1
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1036..1320
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F2FEDC
putative stable inheritance protein
Putative stable inheritance protein {ECO:0000313|EMBL:ABS45631.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
scnpilot_solids2_trim150_scaffold_1402_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1387..2166
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVT7_ACCPU
hypothetical protein; K03496 chromosome partitioning protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37747.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1402_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2163..3143
DNA (981bp) protein (327aa)
ParB-like partition protein n=11 Tax=Bacteria RepID=E8U2P7_ALIDB
ParB family protein; K03497 chromosome partitioning protein, ParB family
KorB {ECO:0000313|EMBL:BAC82031.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_solids2_trim150_scaffold_1402_4

Not on your lists

3146..3490
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=uncultured bacterium pAKD4 RepID=D4N5L2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ADD63317.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1402_5
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3491..3943)
DNA (453bp) protein (151aa)
conjugal transfer protein TraM n=1 Tax=Methylomicrobium buryatense RepID=UPI000345963A
Protein traM {ECO:0000313|EMBL:CCE25811.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
conjugal transfer protein TraM
scnpilot_solids2_trim150_scaffold_1402_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..4668)
DNA (729bp) protein (243aa)
TraL conjugative transfer protein n=3 Tax=Bacteria RepID=D4N5K9_9BACT
TraL conjugative transfer protein {ECO:0000313|EMBL:AFU76018.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
conjugal transfer protein tral
scnpilot_solids2_trim150_scaffold_1402_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5262..5621
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVV9_ACCPU
conjugal transfer relaxosome component TraJ
Uncharacterized protein {ECO:0000313|EMBL:ACV37769.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1402_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5642..7711
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVW0_ACCPU
conjugal transfer relaxase TraI
Uncharacterized protein {ECO:0000313|EMBL:ACV37770.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1402_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7708..9579
DNA (1872bp) protein (624aa)
IncP-type DNA transfer coupling protein TraG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW64_9PROT rbh
IncP-type DNA transfer coupling protein TraG {ECO:0000313|EMBL:CCU63565.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
scnpilot_solids2_trim150_scaffold_1402_10

Not on your lists

9579..10157
DNA (579bp) protein (193aa)
TraF maturation peptidase n=1 Tax=uncultured bacterium RepID=Q1H9X2_9BACT
TraF maturation peptidase {ECO:0000313|EMBL:CAJ43353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer peptidase TraF
scnpilot_solids2_trim150_scaffold_1402_11
unknown

Not on your lists

10279..10449
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1402_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..10654)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7D2_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75339.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_1402_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10927..11553
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7D3_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75338.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_1402_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11566..12189
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7D4_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75337.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_1402_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12550..12870
DNA (321bp) protein (107aa)
Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KK62_STEMA
putative DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:CCH11451.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids2_trim150_scaffold_1402_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12867..13553
DNA (687bp) protein (229aa)
Nuclease (SNase-like) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7H3_NITMU rbh
nuclease rbh
Nuclease (SNase-like) {ECO:0000313|EMBL:ABB75298.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_1402_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14282..14815)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC9_9PROT
WGS project CAUA00000000 data, contig 1 {ECO:0000313|EMBL:CCU60989.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1402_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15362..15700
DNA (339bp) protein (113aa)
COG0286: Type I restriction-modification system methyltransferase subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFR7_9PROT
WGS project CAUA00000000 data, contig 1 {ECO:0000313|EMBL:CCU61013.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1402_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15771..16151
DNA (381bp) protein (127aa)
ParB-like nuclease n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y667_NITMU
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
ParB-like nuclease {ECO:0000313|EMBL:ABB75754.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_1402_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16168..17649
DNA (1482bp) protein (494aa)
ParB-like nuclease n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y667_NITMU
Chromosomal partitioning protein ParB {ECO:0000313|EMBL:KIO48661.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
scnpilot_solids2_trim150_scaffold_1402_21
unknown

Not on your lists

17697..17906
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1402_22
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18395..18625
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62009.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1402_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18622..18996
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHY1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62008.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1402_24
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19048..22560
DNA (3513bp) protein (1171aa)
Helicase domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1Y6_POLGS rbh
Helicase domain protein rbh
Helicase domain protein {ECO:0000313|EMBL:ADZ72047.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1402_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22557..23888
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1Y5_POLGS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ72046.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1402_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23890..24531
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B092_RHILS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS54511.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
scnpilot_solids2_trim150_scaffold_1402_27
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24534..27431
DNA (2898bp) protein (966aa)
Adenine-specific DNA methylase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1Y3_POLGS rbh
Adenine-specific DNA methylase {ECO:0000313|EMBL:ADZ72044.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
adenine-specific DNA methylase; K07445 putative DNA methylase rbh
scnpilot_solids2_trim150_scaffold_1402_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27446..30280
DNA (2835bp) protein (945aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1Y2_POLGS rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ72043.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein; K06922 rbh
scnpilot_solids2_trim150_scaffold_1402_29
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30293..30541
DNA (249bp) protein (83aa)
Abortive phage resistance protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1Y1_POLGS
Abortive phage resistance protein
Abortive phage resistance protein {ECO:0000313|EMBL:ADZ72042.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1402_30
unknown

Not on your lists

comp(30764..31072)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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