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scnpilot_solids2_trim150_scaffold_1406

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1406_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1048
DNA (1047bp) protein (349aa)
Protein translocase subunit SecA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK4_9GAMM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
preprotein translocase, SecA subunit
scnpilot_solids2_trim150_scaffold_1406_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1238..2089)
DNA (852bp) protein (284aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Diadenosine tetraphosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK5_9GAMM rbh
symmetrical bis(5'-nucleosyl)-tetraphosphatase
scnpilot_solids2_trim150_scaffold_1406_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2105..2488)
DNA (384bp) protein (128aa)
Protein ApaG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK6_9GAMM
uncharacterized protein affecting Mg2+/Co2+ transport
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1406_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2533..3321)
DNA (789bp) protein (263aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK7_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1406_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3318..4367)
DNA (1050bp) protein (350aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) rbh
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVN0_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1406_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4386..5726)
DNA (1341bp) protein (447aa)
Chaperone SurA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK9_9GAMM rbh
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
parvulin-like peptidyl-prolyl isomerase
scnpilot_solids2_trim150_scaffold_1406_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5762..8143)
DNA (2382bp) protein (794aa)
LPS-assembly protein LptD n=1 Tax=Rhodanobacter denitrificans RepID=M4NS02_9GAMM
organic solvent tolerance protein OstA
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1406_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8291..9211)
DNA (921bp) protein (307aa)
Deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSL1_9GAMM rbh
Deacetylase {ECO:0000313|EMBL:EIM02453.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
deacetylase, histone deacetylase/acetoin utilization protein
scnpilot_solids2_trim150_scaffold_1406_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9222..9791)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSL2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02454.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP:cob(I)alamin adenosyltransferase rbh
scnpilot_solids2_trim150_scaffold_1406_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9793..10392)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKW1_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90318.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1406_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10526..11716
DNA (1191bp) protein (397aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-) rbh
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:AGG90317.1}; EC=1.14.13.- {ECO:0000313|EMBL:AGG90317.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJN8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1406_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11713..12924
DNA (1212bp) protein (404aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WEV2_9GAMM
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:AGG90316.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1406_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12988..13782
DNA (795bp) protein (265aa)
Dienelactone hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSL6_9GAMM rbh
Dienelactone hydrolase {ECO:0000313|EMBL:EIM02458.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dienelactone hydrolase-like enzyme
scnpilot_solids2_trim150_scaffold_1406_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13937..15397)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHC9_9GAMM rbh
GTPase of unknown function rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90314.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1406_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15489..16157
DNA (669bp) protein (223aa)
Two component system sensor-response regulator hybrid protein (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WEV5_9GAMM
signal transduction histidine kinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1406_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16651..19632
DNA (2982bp) protein (994aa)
Signal transduction histidine kinase n=3 Tax=Rhodanobacter denitrificans RepID=M4NJN1_9GAMM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG90312.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 16 items

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