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scnpilot_solids2_trim150_scaffold_1414

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1414_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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2..142
DNA (141bp) protein (47aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin biosynthesis MoaE protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8U1_NAKMY
Molybdopterin biosynthesis MoaE protein {ECO:0000313|EMBL:ACV81039.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1414_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(198..1586)
DNA (1389bp) protein (463aa)
amidase; K01426 amidase [EC:3.5.1.4]
amidase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625DAB
Amidase {ECO:0000313|EMBL:AIJ22654.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_solids2_trim150_scaffold_1414_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1703..4105)
DNA (2403bp) protein (801aa)
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA25161.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA25161.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPP4_PSEUX rbh
carbon-monoxide dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1414_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4112..4654)
DNA (543bp) protein (181aa)
carbon-monoxide dehydrogenase; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA25160.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA25160.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPP3_PSEUX
scnpilot_solids2_trim150_scaffold_1414_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4651..5523)
DNA (873bp) protein (291aa)
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA25159.1}; EC=1.2.99.2 {ECO:0000313|EMBL:AEA25159.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPP2_PSEUX rbh
carbon-monoxide dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1414_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5538..6647)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPP1_PSEUX rbh
hypothetical protein; K10439 ribose transport system substrate-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25158.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_1414_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6738..7760)
DNA (1023bp) protein (341aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPP0_PSEUX rbh
ABC transporter permease; K10440 ribose transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25157.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_1414_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7760..9244)
DNA (1485bp) protein (495aa)
monosaccharide-transporting ATPase; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA25156.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA25156.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN9_PSEUX rbh
scnpilot_solids2_trim150_scaffold_1414_9
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9334..10062)
DNA (729bp) protein (243aa)
carbon monoxide dehydrogenase subunit G n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035F7B0B
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EFL05818.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
carbon monoxide dehydrogenase subunit G
scnpilot_solids2_trim150_scaffold_1414_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10233..12317
DNA (2085bp) protein (695aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA25153.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA25153.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN6_PSEUX rbh
scnpilot_solids2_trim150_scaffold_1414_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12314..14179
DNA (1866bp) protein (622aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA25154.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA25154.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN7_PSEUX rbh
scnpilot_solids2_trim150_scaffold_1414_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14287..15195
DNA (909bp) protein (303aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPN8_PSEUX
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AIY19452.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
IclR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1414_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15284..15775
DNA (492bp) protein (164aa)
VanZ family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X808_NAKMY
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:ACV81011.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1414_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15860..16051
DNA (192bp) protein (64aa)
ABC transporter ATP-binding protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036D68D8
ABC transporter related protein {ECO:0000313|EMBL:EFC86112.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC transporter related protein
Displaying 14 items

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