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scnpilot_solids2_trim150_scaffold_1421

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1421_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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219..479
DNA (261bp) protein (87aa)
Putative insertion sequence protein n=2 Tax=Rhodanobacter RepID=I4W515_9GAMM
Putative insertion sequence protein {ECO:0000313|EMBL:EIL87455.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ISXoo3 transposase orfA
scnpilot_solids2_trim150_scaffold_1421_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(525..1904)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK67_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88171.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1421_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2262..3416)
DNA (1155bp) protein (385aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE5_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL96786.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_1421_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3835..4641
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ15_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89616.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1421_5
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4779..5408
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP37279.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein id=5079109 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
scnpilot_solids2_trim150_scaffold_1421_6
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5499..6614
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YS09_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO97106.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1421_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6640..7428)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1421_8
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7493..9121)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036965C8
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_1421_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9207..12185)
DNA (2979bp) protein (993aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KS11_9BURK rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EGI77371.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
scnpilot_solids2_trim150_scaffold_1421_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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12455..12949
DNA (495bp) protein (165aa)
cupin n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000362924F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_1421_11
unknown

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13388..14812
DNA (1425bp) protein (475aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1421_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15117..16586
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037EC0CD
Sulfotransferase {ECO:0000313|EMBL:EIL97712.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein
scnpilot_solids2_trim150_scaffold_1421_13

Not on your lists

16697..17707
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036AA2D2
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase {ECO:0000313|EMBL:EQD61345.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1421_14
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17720..18469)
DNA (750bp) protein (250aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CCH87731.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CCH87731.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWG8_MODMB
scnpilot_solids2_trim150_scaffold_1421_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18502..18849)
DNA (348bp) protein (116aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z9_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EIL95240.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short chain dehydrogenase
Displaying 15 items

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