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scnpilot_solids2_trim150_scaffold_1432

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1432_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1096)
DNA (1095bp) protein (365aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN4_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1432_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1117..1521)
DNA (405bp) protein (135aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN5_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL88476.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1432_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1518..1913)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W036_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL92827.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1432_4
unknown

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comp(2011..2199)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1432_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2319..3122
DNA (804bp) protein (268aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH3_9GAMM
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AGG89475.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1432_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3583..4017
DNA (435bp) protein (145aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1432_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4142..4633)
DNA (492bp) protein (164aa)
Outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH5_9GAMM
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AGG89477.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1432_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4680..5309)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88482.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_1432_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5469..6248
DNA (780bp) protein (260aa)
TatD family hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP99_9GAMM
TatD family hydrolase {ECO:0000313|EMBL:EIM01291.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hydrolase, TatD family
scnpilot_solids2_trim150_scaffold_1432_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6428..6913
DNA (486bp) protein (162aa)
Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP7_9GAMM
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:EIL88488.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polyhydroxyalkanoate synthesis repressor PhaR
scnpilot_solids2_trim150_scaffold_1432_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..7753
DNA (762bp) protein (254aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89485.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89485.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI4_9GAMM
scnpilot_solids2_trim150_scaffold_1432_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7929..8333
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W051_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3293)
scnpilot_solids2_trim150_scaffold_1432_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8392..9027
DNA (636bp) protein (212aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cytochrome c biogenesis protein CcmA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W052_9GAMM
heme ABC exporter, ATP-binding protein CcmA
scnpilot_solids2_trim150_scaffold_1432_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9199..9849
DNA (651bp) protein (217aa)
Heme exporter protein B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W053_9GAMM
heme exporter protein CcmB
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1432_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9854..10612
DNA (759bp) protein (253aa)
Heme exporter protein CcmC n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI9_9GAMM
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:AGG89490.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1432_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10609..10848
DNA (240bp) protein (80aa)
Cytochrome C biogenesis protein CcmD n=1 Tax=Rhodanobacter sp. 115 RepID=I4WT35_9GAMM
Cytochrome C biogenesis protein CcmD {ECO:0000313|EMBL:EIM02627.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
heme exporter protein CcmD
scnpilot_solids2_trim150_scaffold_1432_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10845..11327
DNA (483bp) protein (161aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMR9_9GAMM
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c-type biogenesis protein CcmE
scnpilot_solids2_trim150_scaffold_1432_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11386..13377
DNA (1992bp) protein (664aa)
C-type cytochrome biogenesis membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMS0_9GAMM
C-type cytochrome biogenesis membrane protein {ECO:0000313|EMBL:EIL88511.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
c-type cytochrome biogenesis protein CcmF
scnpilot_solids2_trim150_scaffold_1432_19
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13374..13916
DNA (543bp) protein (181aa)
thiol:disulfide interchange protein n=1 Tax=Dyella japonica RepID=UPI00031607D7
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AHX12712.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily
scnpilot_solids2_trim150_scaffold_1432_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13916..14386
DNA (471bp) protein (157aa)
C-type cytochromes biosynthesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWJ4_9GAMM
uncharacterized protein involved in biosynthesis of c-type cytochromes
Uncharacterized protein involved in biosynthesis of c-type cytochromes {ECO:0000313|EMBL:AGG89495.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1432_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14416..15093
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01231.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1432_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15093..15941
DNA (849bp) protein (283aa)
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWJ6_9GAMM
Displaying 22 items

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