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scnpilot_solids2_trim150_scaffold_1435

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1435_1
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPQ9_9PROT
NAD-dependent epimerase/dehydratase
Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
scnpilot_solids2_trim150_scaffold_1435_2
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(372..1457)
DNA (1086bp) protein (362aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase, family GT4 {ECO:0000313|EMBL:CAZ96058.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAZ96058.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Glycosyltransferase, family GT4 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L598_ZOBGA
scnpilot_solids2_trim150_scaffold_1435_3
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1513..2655)
DNA (1143bp) protein (381aa)
glycosyltransferase (EC:2.4.1.-) rbh
Glycosyltransferase, family GT4 {ECO:0000313|EMBL:CAZ96058.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAZ96058.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Glycosyltransferase, family GT4 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L598_ZOBGA rbh
scnpilot_solids2_trim150_scaffold_1435_4
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2742..3926)
DNA (1185bp) protein (395aa)
Glycosyl transferase group 1 id=2003502 bin=GWD2_Bacteroidetes_33_33 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
glycosyltransferase
Tax=GWD2_Bacteroidetes_33_33_curated
scnpilot_solids2_trim150_scaffold_1435_5
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3930..5240)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein id=4524276 bin=GWA2_Bacteroidetes_A19_40_15 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_1435_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5300..6589)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR24_HALH1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE53262.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_1435_7
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6582..7823)
DNA (1242bp) protein (414aa)
Glycosyl transferase, group 1 family protein n=2 Tax=Bacteroidetes RepID=S7VDA1_9BACT rbh
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EPR67542.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
group 1 glycosyl transferase rbh
scnpilot_solids2_trim150_scaffold_1435_8
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7851..8864)
DNA (1014bp) protein (338aa)
hypothetical protein n=2 Tax=cellular organisms RepID=UPI0003730FF0
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
scnpilot_solids2_trim150_scaffold_1435_9
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8952..10328)
DNA (1377bp) protein (459aa)
O-antigen flippase Wzx id=3753944 bin=GWC2_Bacteroidetes_40_22 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
polysaccharide biosynthesis protein rbh
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_1435_10
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10402..11490)
DNA (1089bp) protein (363aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FL05_9BACT
scnpilot_solids2_trim150_scaffold_1435_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11650..12186)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003727E49
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:AEV96482.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1435_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12323..14671)
DNA (2349bp) protein (783aa)
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK47_NIAKG rbh
capsular exopolysaccharide family protein rbh
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEV96481.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1435_13
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14686..15477)
DNA (792bp) protein (264aa)
Soluble ligand binding domain-containing protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FK57_9BACT
Soluble ligand binding domain-containing protein {ECO:0000313|EMBL:EJF10726.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
Soluble ligand binding domain-containing protein; K01991 polysaccharide export outer membrane protein
Displaying 13 items

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