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scnpilot_solids2_trim150_scaffold_1440

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1440_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..3086)
DNA (3084bp) protein (1028aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY12_PEDHD rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU04430.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1440_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3288..4220)
DNA (933bp) protein (311aa)
Arylsulfatase A family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G6B7_ECHVK
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA80526.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids2_trim150_scaffold_1440_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4307..5440)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3M1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18851.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
scnpilot_solids2_trim150_scaffold_1440_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5544..5954)
DNA (411bp) protein (137aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxyacid dehydratase {ECO:0000313|EMBL:ABJ86810.1}; EC=4.2.1.9 {ECO:0000313|EMBL:ABJ86810.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Dihydroxyacid dehydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U60_SOLUE
scnpilot_solids2_trim150_scaffold_1440_5
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5947..7278)
DNA (1332bp) protein (444aa)
ilvd3; dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376E867
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:EZP38413.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
scnpilot_solids2_trim150_scaffold_1440_6
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7372..8313)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000362C5E5
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEI49585.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1440_7
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8643..9881
DNA (1239bp) protein (413aa)
Transposase, IS4 family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXG7_9GAMM
Transposase, IS4 family {ECO:0000313|EMBL:EEV23019.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacter aerosaccus SK60.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1440_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9980..10666)
DNA (687bp) protein (229aa)
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY14_PEDHD rbh
GntR family transcriptional regulator rbh
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU04432.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_1440_9
unknown

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comp(10998..11165)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1440_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11295..12029)
DNA (735bp) protein (245aa)
MIP family channel protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBJ4_NIAKG rbh
MIP family channel protein; K02440 glycerol uptake facilitator protein rbh
MIP family channel protein {ECO:0000313|EMBL:AEV97104.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1440_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12188..13678)
DNA (1491bp) protein (497aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
glycerol kinase n=1 Tax=Segetibacter koreensis RepID=UPI0003725D07 rbh
scnpilot_solids2_trim150_scaffold_1440_12
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13873..14634)
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1V7_SPHS2
DeoR family transcriptional regulator; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
Glucitol operon repressor {ECO:0000313|EMBL:KHJ39045.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
scnpilot_solids2_trim150_scaffold_1440_13
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14911..15888
DNA (978bp) protein (326aa)
glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Glycerol-3-phosphate dehydrogenase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EEZ0_9SPHI
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:EDM36061.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
Displaying 13 items

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