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scnpilot_solids2_trim150_scaffold_1445

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1445_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
Thioredoxin reductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GEI5_9BRAD
scnpilot_solids2_trim150_scaffold_1445_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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229..768
DNA (540bp) protein (180aa)
Protein tyrosine phosphatase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3N0_CAUSK
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABZ70916.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids2_trim150_scaffold_1445_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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797..1324
DNA (528bp) protein (176aa)
ArsR family transcriptional regulator n=2 Tax=Pandoraea RepID=V5UK73_9BURK
protein-tyrosine phosphatase, low molecular weight
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_1445_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1640..2665
DNA (1026bp) protein (342aa)
Phosphate-binding protein PstS n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MIN3_RHIL3 rbh
solute-binding component of ABC transporter; K02040 phosphate transport system substrate-binding protein rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
scnpilot_solids2_trim150_scaffold_1445_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2758..3753
DNA (996bp) protein (332aa)
phosphate ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C7E21 rbh
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EJJ27900.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transmembrane component of ABC transporter; K02037 phosphate transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_1445_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3755..4612
DNA (858bp) protein (286aa)
phosphate transporter permease subunit PtsA n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003690C8E rbh
transmembrane component of ABC transporter; K02038 phosphate transport system permease protein rbh
Putative transmembrane component of ABC transporter {ECO:0000313|EMBL:CAK07179.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
scnpilot_solids2_trim150_scaffold_1445_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4605..5411
DNA (807bp) protein (269aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
ABC transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003661FAD rbh
scnpilot_solids2_trim150_scaffold_1445_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5466..6197
DNA (732bp) protein (244aa)
PhoU family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI000366E529
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_1445_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6212..6928
DNA (717bp) protein (239aa)
chemotaxis protein CheY n=1 Tax=Methylobacterium sp. 77 RepID=UPI000378DC33
two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS65461.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_1445_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6922..7890
DNA (969bp) protein (323aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME3_XANP2
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ABS69186.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_1445_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7916..8773
DNA (858bp) protein (286aa)
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME4_XANP2
scnpilot_solids2_trim150_scaffold_1445_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8770..9576
DNA (807bp) protein (269aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME5_XANP2
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69188.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_1445_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..10394
DNA (831bp) protein (277aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME6_XANP2
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69189.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_1445_14
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10506..11519)
DNA (1014bp) protein (338aa)
Monooxygenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NKC6_9RHIZ
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGJ22102.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
monooxygenase
scnpilot_solids2_trim150_scaffold_1445_15
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11573..12328)
DNA (756bp) protein (252aa)
NADPH-dependent FMN reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ29_SPHAL
NADPH-dependent FMN reductase; K11811 arsenical resistance protein ArsH
Arsenical resistance protein {ECO:0000313|EMBL:KEC78355.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
scnpilot_solids2_trim150_scaffold_1445_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12430..12849)
DNA (420bp) protein (140aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
arsC; arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
arsenate reductase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034CC11E
scnpilot_solids2_trim150_scaffold_1445_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12927..13295)
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ0_PELHB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEQ52773.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
scnpilot_solids2_trim150_scaffold_1445_18
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13492..13815
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX3_9BRAD
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62879.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1445_19
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13865..15229
DNA (1365bp) protein (455aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX4_9BRAD rbh
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EIG62880.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1445_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15220..15840
DNA (621bp) protein (207aa)
Major facilitator superfamily MFS_1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK95_OLICO
major facilitator superfamily protein
Putative MFS transporter protein {ECO:0000313|EMBL:AEI08271.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 20 items

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