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scnpilot_solids2_trim150_scaffold_1485

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1485_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..846)
DNA (846bp) protein (282aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA topoisomerase 4 subunit B n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ2_9GAMM
DNA topoisomerase IV, B subunit, proteobacterial
scnpilot_solids2_trim150_scaffold_1485_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(922..2769)
DNA (1848bp) protein (616aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NLD3_9GAMM
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG88536.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1485_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2929..3744
DNA (816bp) protein (272aa)
Arylamine N-acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLJ5_9GAMM
arylamine N-acetyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1485_4
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3812..4273)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EV83_CUPNN
hypothetical protein
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AAZ62116.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
scnpilot_solids2_trim150_scaffold_1485_5
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4516..5277
DNA (762bp) protein (254aa)
NADP oxidoreductase coenzyme F420-dependent; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
UPI0003CE3686 related cluster n=1 Tax=unknown RepID=UPI0003CE3686
NADP oxidoreductase {ECO:0000313|EMBL:ESX49878.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
scnpilot_solids2_trim150_scaffold_1485_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5291..5707)
DNA (417bp) protein (139aa)
RNA-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI2_9GAMM
RNA-binding protein {ECO:0000313|EMBL:EIM02074.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA-binding protein; K14761 ribosome-associated protein
scnpilot_solids2_trim150_scaffold_1485_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5741..7387
DNA (1647bp) protein (549aa)
Enterochelin esterase-like enzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMF6_9GAMM
Enterochelin esterase-like enzyme {ECO:0000313|EMBL:EIL88397.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
enterochelin esterase-like enzyme
scnpilot_solids2_trim150_scaffold_1485_8
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7576..8349
DNA (774bp) protein (258aa)
Transcriptional activator CopR n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUG6_9PROT
Two component transcriptional regulator CopR {ECO:0000313|EMBL:GAN80586.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
czcR; regulatory protein CzcR; K02483 two-component system, OmpR family, response regulator
scnpilot_solids2_trim150_scaffold_1485_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8402..9799
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
czcS; transmembrane sensory transduction histidine kinase for cobalt zinc cadmium resistance protein; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YTW7_9PROT rbh
scnpilot_solids2_trim150_scaffold_1485_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10142..10303
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5W7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78193.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative integral membrane protein
scnpilot_solids2_trim150_scaffold_1485_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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10467..12623
DNA (2157bp) protein (719aa)
TonB-dependent receptor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK0_9PROT
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids2_trim150_scaffold_1485_12
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12611..13756)
DNA (1146bp) protein (382aa)
Aminotransferase class I and II n=1 Tax=Burkholderia sp. RPE64 RepID=R4WWG1_9BURK rbh
aminotransferase class I and II rbh
Tax=BJP_IG2157_Desulfuromonadales_56_134
scnpilot_solids2_trim150_scaffold_1485_13
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13953..14375)
DNA (423bp) protein (141aa)
Putative bacteriophage protein transcription regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WKY3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21900.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative bacteriophage protein transcription regulator
scnpilot_solids2_trim150_scaffold_1485_14
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14698..14901)
DNA (204bp) protein (68aa)
Transposase insN for insertion sequence element IS911A n=2 Tax=Xanthomonas campestris pv. translucens RepID=K8ZGR3_XANCT
Transposase insN for insertion sequence element IS911A {ECO:0000313|EMBL:EKU25818.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
XALc; isxal7 transposase orfa protein
scnpilot_solids2_trim150_scaffold_1485_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15025..15396)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000378A04A
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 15 items

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