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scnpilot_solids2_trim150_scaffold_1498

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1498_1
unknown

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191..886
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(894..1727)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036059AB
glutamine cyclotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1498_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2040..3263
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L1Y3_SAPGL rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_1498_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3348..4466)
DNA (1119bp) protein (373aa)
alkyl hydroperoxide reductase id=720047 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
alkyl hydroperoxide reductase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_1498_5
unknown

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4641..5138
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI000378800C
scnpilot_solids2_trim150_scaffold_1498_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5274..6902)
DNA (1629bp) protein (543aa)
Arylsulfatase {ECO:0000313|EMBL:EDO53054.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDO53054.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Arylsulfatase n=2 Tax=Bacteroides RepID=A7V656_BACUN rbh
sulfatase rbh
scnpilot_solids2_trim150_scaffold_1498_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7062..7370)
DNA (309bp) protein (103aa)
Transposase IS200/IS605 family id=4573493 bin=GWF2_Bacteroidetes_41_31 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
transposase IS200/IS605 family
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_solids2_trim150_scaffold_1498_8
unknown

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comp(7330..7482)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7675..8748)
DNA (1074bp) protein (358aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849, ECO:0000256|SAAS:SAAS00181424};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {E
23S rRNA m(2)A-2503 methyltransferase; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG
scnpilot_solids2_trim150_scaffold_1498_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8873..10093
DNA (1221bp) protein (407aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEW03271.1}; EC=2.3.1.174 {ECO:0000313|EMBL:AEW03271.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT6_NIAKG rbh
acetyl-CoA acetyltransferase rbh
scnpilot_solids2_trim150_scaffold_1498_11
unknown

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comp(10100..10258)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10447..10713
DNA (267bp) protein (89aa)
Sec-independent translocation protein mttA/Hcf106 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT2_NIAKG
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
sec-independent translocation protein mttA/Hcf106; K03116 sec-independent protein translocase protein TatA
scnpilot_solids2_trim150_scaffold_1498_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10841..14392)
DNA (3552bp) protein (1184aa)
Chromosome partition protein Smc n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T4_NIAKG
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
condensin subunit Smc; K03529 chromosome segregation protein
scnpilot_solids2_trim150_scaffold_1498_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14608..15420
DNA (813bp) protein (271aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH23_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW00634.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1498_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15475..16491)
DNA (1017bp) protein (339aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR7_NIAKG
scnpilot_solids2_trim150_scaffold_1498_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16460..17239)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003795436
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98510.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1498_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17285..17692
DNA (408bp) protein (136aa)
OsmC family protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PP07_MURRD
OsmC family protein {ECO:0000313|EMBL:KIC93833.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
OsmC family protein
scnpilot_solids2_trim150_scaffold_1498_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17739..19007)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036560A6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97996.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1498_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19446..19928)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSQ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64506.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1498_20
unknown

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comp(20213..20779)
DNA (567bp) protein (189aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_21
unknown

Not on your lists

comp(20931..21509)
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_22
unknown

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comp(21644..21781)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1498_trna_1
unknown

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21925..22008
DNA (84bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_1498_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22083..22655)
DNA (573bp) protein (191aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT20_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCH57049.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
xylose isomerase domain-containing protein
Displaying 24 items

View Taxonomy