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scnpilot_solids2_trim150_scaffold_1531

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1531_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..511
DNA (510bp) protein (170aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX8_9GAMM
3-isopropylmalate dehydrogenase
scnpilot_solids2_trim150_scaffold_1531_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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796..2499
DNA (1704bp) protein (568aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX7_9GAMM rbh
dihydroxyacid dehydratase/phosphogluconate dehydratase
scnpilot_solids2_trim150_scaffold_1531_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2496..3506
DNA (1011bp) protein (337aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX6_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1531_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3657..5513
DNA (1857bp) protein (619aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetolactate synthase, large subunit (EC:2.2.1.6) rbh
Acetolactate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1531_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5602..5850
DNA (249bp) protein (83aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX4_9GAMM
Acetolactate synthase small subunit {ECO:0000313|EMBL:EIL92065.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1531_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5847..7397
DNA (1551bp) protein (517aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
L-threonine ammonia-lyase (EC:4.3.1.19) rbh
Threonine dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX3_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1531_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7472..8497
DNA (1026bp) protein (342aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-) rbh
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX0_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1531_8
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8627..10687
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003822120 rbh
Uncharacterized protein {ECO:0000313|EMBL:ELX10635.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1531_9
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10706..11698)
DNA (993bp) protein (331aa)
Glycosyl transferase family 2 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT09_ACCPU rbh
family 2 glycosyl transferase rbh
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_1531_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11695..12081)
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002ECB1E1
Uncharacterized protein {ECO:0000313|EMBL:KFN48792.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1531_11
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12326..13282
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HW71_PSEUO rbh
Uncharacterized protein {ECO:0000313|EMBL:ETM67697.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
scnpilot_solids2_trim150_scaffold_1531_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13314..14027)
DNA (714bp) protein (238aa)
Putative amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXW9_9GAMM rbh
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EIL92060.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative amidophosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_1531_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14036..14134)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXW8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92059.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_1531_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14661..15089
DNA (429bp) protein (143aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXW7_9GAMM
Displaying 14 items

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