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scnpilot_solids2_trim150_scaffold_1571

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1571_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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258..1478
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWQ6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1571_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1773..3872)
DNA (2100bp) protein (700aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
polyphosphate kinase n=1 Tax=Dyella japonica RepID=UPI0002DB59C8
polyphosphate kinase 1
scnpilot_solids2_trim150_scaffold_1571_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3911..4450)
DNA (540bp) protein (180aa)
phosphoesterase PA-phosphatase n=1 Tax=Dyella japonica RepID=UPI0002FF02FC
Phosphoesterase {ECO:0000313|EMBL:AIF48557.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PAP2 superfamily protein
scnpilot_solids2_trim150_scaffold_1571_4

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comp(4425..5570)
DNA (1146bp) protein (382aa)
Glycosyl transferase, group 1 family protein n=2 Tax=mine drainage metagenome RepID=T0YAZ0_9ZZZZ
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EQD28967.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_1571_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5717..6766)
DNA (1050bp) protein (350aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E3AB74
phosphate regulon sensor kinase PhoR
scnpilot_solids2_trim150_scaffold_1571_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6907..7458)
DNA (552bp) protein (184aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES8_9GAMM
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:EIL97969.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphate regulon transcriptional regulatory protein PhoB
scnpilot_solids2_trim150_scaffold_1571_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7673..8263
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90221.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1571_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8301..9122)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W493_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94284.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3014)
scnpilot_solids2_trim150_scaffold_1571_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9346..10578)
DNA (1233bp) protein (411aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL8_9GAMM
ABC-type antimicrobial peptide transport system, permease component
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_1571_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10580..11887)
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL9_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL99660.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_1571_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11998..12738)
DNA (741bp) protein (247aa)
LytTR family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B61E7F
Putative response regulator {ECO:0000313|EMBL:KFC76496.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Positive alginate biosynthesis regulatory protein
scnpilot_solids2_trim150_scaffold_1571_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12735..13853)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003616F38
Sensor protein LytS {ECO:0000313|EMBL:KGF82462.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1571_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14061..14735)
DNA (675bp) protein (225aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003619426
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 13 items

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