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scnpilot_solids2_trim150_scaffold_1589

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1589_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1630)
DNA (1629bp) protein (543aa)
DNA/RNA helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY8_9GAMM
DNA/RNA helicase {ECO:0000313|EMBL:EIL89629.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA/RNA helicase, superfamily II, SNF2 family
scnpilot_solids2_trim150_scaffold_1589_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1742..2767)
DNA (1026bp) protein (342aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1589_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3280)
DNA (504bp) protein (168aa)
Protein-export protein SecB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ0_9GAMM rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein translocase subunit secB
scnpilot_solids2_trim150_scaffold_1589_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3573..3809
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ1_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LSU ribosomal protein L28P
scnpilot_solids2_trim150_scaffold_1589_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3820..3987
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ2_9GAMM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein L33
scnpilot_solids2_trim150_scaffold_1589_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..4652
DNA (576bp) protein (192aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ3_9GAMM rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89634.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1589_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4642..5058
DNA (417bp) protein (139aa)
Putative thiol-disulfide oxidoreductase DCC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ4_9GAMM
Putative thiol-disulfide oxidoreductase DCC {ECO:0000313|EMBL:EIL89635.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1589_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5048..6223)
DNA (1176bp) protein (392aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ5_9GAMM rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89636.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Saccharopine dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1589_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6236..7429)
DNA (1194bp) protein (398aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM rbh
Fatty-acid desaturase {ECO:0000313|EMBL:EIL89637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fatty-acid desaturase
scnpilot_solids2_trim150_scaffold_1589_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8354
DNA (762bp) protein (254aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ7_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL89638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids2_trim150_scaffold_1589_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8351..9106
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ8_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL89639.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1589_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9106..10461
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type uncharacterized transporter
scnpilot_solids2_trim150_scaffold_1589_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10465..10962
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR00_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89641.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1589_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11129..11956
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR01_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1589_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12204..12803
DNA (600bp) protein (200aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR02_9GAMM rbh
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL89643.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
oxidoreductase family protein; K07078
scnpilot_solids2_trim150_scaffold_1589_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12872..13642)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR03_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89644.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1589_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13665..14297)
DNA (633bp) protein (211aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thymidine kinase (EC:2.7.1.21) rbh
Thymidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR04_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1589_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14428..14589)
DNA (162bp) protein (54aa)
Hydroxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR05_9GAMM
Hydroxylase {ECO:0000313|EMBL:EIL89646.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavin-dependent dehydrogenase
Displaying 18 items

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