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scnpilot_solids2_trim150_scaffold_1592

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1592_1
unknown

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1592_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(195..983)
DNA (789bp) protein (263aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Rhodanobacter denitrificans RepID=I4WXN2_9GAMM
type IV pilus biogenesis/stability protein PilW
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1592_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(973..2118)
DNA (1146bp) protein (382aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Rhodanobacter denitrificans RepID=I4WXN1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1592_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2182..2607)
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIC6_9GAMM
scnpilot_solids2_trim150_scaffold_1592_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2792..3454
DNA (663bp) protein (221aa)
Transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRU8_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL89939.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1592_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3511..5898
DNA (2388bp) protein (796aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG88907.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AGG88907.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXM8_9GAMM
scnpilot_solids2_trim150_scaffold_1592_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5952..7157
DNA (1206bp) protein (402aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIL90478.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIL90478.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTD7_9GAMM
acetyl-CoA acetyltransferase
scnpilot_solids2_trim150_scaffold_1592_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7193..7753)
DNA (561bp) protein (187aa)
Putative cytochrome B561 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGF8_9GAMM
Putative cytochrome B561 {ECO:0000313|EMBL:EIL98549.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome b561
scnpilot_solids2_trim150_scaffold_1592_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7750..8841)
DNA (1092bp) protein (364aa)
Catalase-related peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG9_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_1592_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9130..9801)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NI39_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89767.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1592_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9788..10444)
DNA (657bp) protein (219aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3S2_9GAMM
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL94113.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase, sigma subunit, ECF family
scnpilot_solids2_trim150_scaffold_1592_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10578..12299
DNA (1722bp) protein (574aa)
Redoxin domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJD4_9GAMM
Redoxin domain-containing protein {ECO:0000313|EMBL:EIL87325.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c biogenesis protein
scnpilot_solids2_trim150_scaffold_1592_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12341..12937
DNA (597bp) protein (199aa)
Methionine-R-sulfoxide reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJD3_9GAMM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIL87324.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
methionine-R-sulfoxide reductase
scnpilot_solids2_trim150_scaffold_1592_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12980..13687
DNA (708bp) protein (236aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI0_9GAMM
methionine-S-sulfoxide reductase
scnpilot_solids2_trim150_scaffold_1592_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13862..14413
DNA (552bp) protein (184aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:AGG89732.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AGG89732.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY85_9GAMM
scnpilot_solids2_trim150_scaffold_1592_16
unknown

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14514..14573
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 16 items

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