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scnpilot_solids2_trim150_scaffold_1619

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1619_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..688)
DNA (687bp) protein (229aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
phosphopantothenoylcysteine decarboxylase n=1 Tax=Dyella japonica RepID=UPI0003024012
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:AIF46266.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_1619_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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786..1457
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW2_9GAMM
DNA repair protein
DNA repair protein radc {ECO:0000313|EMBL:EIL87853.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_1619_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1849..3537
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW1_9GAMM
scnpilot_solids2_trim150_scaffold_1619_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3537..4271
DNA (735bp) protein (245aa)
Cell division protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMP3_9GAMM
cell division protein
Cell division protein {ECO:0000313|EMBL:AGG90908.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1619_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4320..5072
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV9_9GAMM
short-chain alcohol dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1619_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..6975)
DNA (1890bp) protein (630aa)
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX2_9GAMM
scnpilot_solids2_trim150_scaffold_1619_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7236..8090
DNA (855bp) protein (285aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX3_9GAMM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1619_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8182..9225
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87844.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1619_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9338..9973
DNA (636bp) protein (212aa)
ATPase involved in chromosome partitioning n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ01_9GAMM
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG90915.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1619_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10029..10502
DNA (474bp) protein (158aa)
Phosphohistidine phosphatase SixA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV1_9GAMM
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIL87842.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phosphohistidine phosphatase SixA
scnpilot_solids2_trim150_scaffold_1619_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10578..12467
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003464BFE
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EIL86786.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_1619_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12721..13125)
DNA (405bp) protein (135aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ3_9GAMM
biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AGG87197.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1619_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13131..13556)
DNA (426bp) protein (142aa)
Biopolymer transport ExbD1 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL93_9GAMM
Biopolymer transport ExbD1 protein {ECO:0000313|EMBL:EIL87984.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
biopolymer transport protein
scnpilot_solids2_trim150_scaffold_1619_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13568..14341)
DNA (774bp) protein (258aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA03_9GAMM
biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AGG87195.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 14 items

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