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scnpilot_solids2_trim150_scaffold_1640

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1640_1
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..549
DNA (549bp) protein (183aa)
Membrane protein {ECO:0000313|EMBL:KJC62991.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
Putative uncharacterized protein id=7721119 bin=CNBR_ACT species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
scnpilot_solids2_trim150_scaffold_1640_2
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(642..1097)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003636173
Putative transcriptional regulatory protein (probably MerR-family)
Transcriptional regulator MerR-family {ECO:0000313|EMBL:KCN26440.1}; TaxID=1423447 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis BTB05-348.;"
scnpilot_solids2_trim150_scaffold_1640_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1145..1396
DNA (252bp) protein (84aa)
Metal-binding protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G2K4_AMYMS
metal-binding protein
Metal-binding protein {ECO:0000313|EMBL:AEK45551.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
scnpilot_solids2_trim150_scaffold_1640_4
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1563..3722
DNA (2160bp) protein (720aa)
ctpA; cation-transporting P-type ATPase (EC:3.6.3.-); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
carbonate dehydratase n=1 Tax=Kribbella catacumbae RepID=UPI0003770691
Carbonate dehydratase {ECO:0000313|EMBL:KFG76919.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
scnpilot_solids2_trim150_scaffold_1640_5
unknown

Not on your lists

3787..4191
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1640_6
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4310..4798
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037BC63C
Uncharacterized protein {ECO:0000313|EMBL:EMR00139.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1640_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5236..5904
DNA (669bp) protein (223aa)
Redoxin domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAH1_NAKMY
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACV77336.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1640_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6117..6338
DNA (222bp) protein (74aa)
Putative Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:CCG02805.1}; EC=2.4.99.- {ECO:0000313|EMBL:CCG02805.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Putative Prolipoprotein diacylglyceryl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ36_BLASD
lgt2; putative Prolipoprotein diacylglyceryl transferase
scnpilot_solids2_trim150_scaffold_1640_9
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6556..8526)
DNA (1971bp) protein (657aa)
UPI0003D83BA4 related cluster n=1 Tax=unknown RepID=UPI0003D83BA4 rbh
Copper resistance protein CopC {ECO:0000313|EMBL:AHE40220.1}; TaxID=1436084 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
Copper resistance protein CopC; K14166 copper transport protein rbh
scnpilot_solids2_trim150_scaffold_1640_10
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8601..8882)
DNA (282bp) protein (94aa)
Glutaredoxin 2 n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4G0_STREN
Glutaredoxin 2
Glutaredoxin 2 {ECO:0000313|EMBL:AEW95114.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
scnpilot_solids2_trim150_scaffold_1640_11
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8879..9583)
DNA (705bp) protein (235aa)
UPI0003D91994 related cluster n=1 Tax=unknown RepID=UPI0003D91994
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AHE40224.1}; TaxID=1436084 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
alkyl hydroperoxide reductase
scnpilot_solids2_trim150_scaffold_1640_12
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9576..10517)
DNA (942bp) protein (314aa)
UPI0003D8A6C3 related cluster n=1 Tax=unknown RepID=UPI0003D8A6C3 rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AHE40225.1}; TaxID=1436084 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
Cytochrome c biogenesis protein transmembrane region rbh
scnpilot_solids2_trim150_scaffold_1640_13
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10814..11035
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035EE456
Uncharacterized protein {ECO:0000313|EMBL:EGD42844.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
scnpilot_solids2_trim150_scaffold_1640_14
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11067..12011)
DNA (945bp) protein (315aa)
Zn-dependent protease with chaperone function n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TQ34_MYCSR
Zn-dependent protease with chaperone function
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:ADU01957.1}; Flags: Precursor;; TaxID=278137 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain Spyr1).;"
scnpilot_solids2_trim150_scaffold_1640_15
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12008..12376)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036D4384
Penicillinase repressor family protein {ECO:0000313|EMBL:ETZ29843.1}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;"
transcriptional regulator BlaI
scnpilot_solids2_trim150_scaffold_1640_16
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12848..13294)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSY9_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:KGN35603.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1640_17
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14039..14647
DNA (609bp) protein (203aa)
Membrane protein {ECO:0000313|EMBL:KJC62991.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
Putative uncharacterized protein id=7721119 bin=CNBR_ACT species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Displaying 17 items

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