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scnpilot_solids2_trim150_scaffold_1669

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1669_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..412
DNA (411bp) protein (137aa)
Twitching motility protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU7_9GAMM
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:AGG88012.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1669_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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737..3793
DNA (3057bp) protein (1019aa)
Putative TonB dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU6_9GAMM rbh
Putative TonB dependent receptor protein {ECO:0000313|EMBL:EIL99737.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative TonB dependent receptor protein rbh
scnpilot_solids2_trim150_scaffold_1669_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3915..4292)
DNA (378bp) protein (126aa)
Transport-associated protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU5_9GAMM
Transport-associated protein {ECO:0000313|EMBL:EIL99736.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative periplasmic or secreted lipoprotein
scnpilot_solids2_trim150_scaffold_1669_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4625..6784)
DNA (2160bp) protein (720aa)
TonB-dependent siderophore receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NBN3_9GAMM rbh
TonB-dependent siderophore receptor rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AGG88014.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1669_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6981..7673
DNA (693bp) protein (231aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=M4NBI8_9GAMM rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88015.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1669_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7666..8934
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ39_9GAMM rbh
signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_1669_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9080..10864)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99735.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1669_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10965..11891)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU3_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1669_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11926..12375)
DNA (450bp) protein (150aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative Holliday junction resolvase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU2_9GAMM
RNAse H-fold protein YqgF
scnpilot_solids2_trim150_scaffold_1669_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12372..12941)
DNA (570bp) protein (190aa)
UPF0301 protein UUA_08064 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU1_9GAMM rbh
UPF0301 protein UUA_08064 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_1669_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..13863)
DNA (870bp) protein (290aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ34_9GAMM rbh
TonB family protein rbh
TonB family protein {ECO:0000313|EMBL:AGG88021.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1669_12
unknown

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comp(13860..13949)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 12 items

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