ggKbase home page

scnpilot_solids2_trim150_scaffold_1671

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1671_1
unknown

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1671_2
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(63..272)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B5063F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR36711.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
scnpilot_solids2_trim150_scaffold_1671_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

414..617
DNA (204bp) protein (68aa)
XRE family transcriptional regulator n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B643A7
Uncharacterized protein {ECO:0000313|EMBL:KIY12552.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1671_4
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

772..2025
DNA (1254bp) protein (418aa)
Abortive phage infection protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5D1_9RHIZ rbh
Abortive phage infection protein {ECO:0000313|EMBL:EHS52047.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1671_5
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1997..2458
DNA (462bp) protein (154aa)
Abortive phage infection protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5D1_9RHIZ
Abortive phage infection protein {ECO:0000313|EMBL:KJF74121.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1671_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2887..4164
DNA (1278bp) protein (426aa)
Integrase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1B2_POLGS rbh
integrase rbh
Integrase family protein {ECO:0000313|EMBL:ADZ68757.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1671_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4343..4606
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1B1_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ68756.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1671_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4584..4907
DNA (324bp) protein (108aa)
Putative DNA-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1B0_POLGS
DNA-binding protein; K07726 putative transcriptional regulator
Putative DNA-binding protein {ECO:0000313|EMBL:ADZ68755.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids2_trim150_scaffold_1671_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5500..7062)
DNA (1563bp) protein (521aa)
adenylate cyclase (EC:4.6.1.1) rbh
Adenylate cyclase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TKV4_MESCW rbh
Uncharacterized protein {ECO:0000313|EMBL:BAR58433.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
scnpilot_solids2_trim150_scaffold_1671_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7171..7632
DNA (462bp) protein (154aa)
UPI0003CEEAB0 related cluster n=1 Tax=unknown RepID=UPI0003CEEAB0
Uncharacterized protein {ECO:0000313|EMBL:BAR58434.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
cupin
scnpilot_solids2_trim150_scaffold_1671_11
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7711..8517)
DNA (807bp) protein (269aa)
Type 11 methyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LNC7_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:EIZ86564.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_1671_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9053..10909)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000379FBAE rbh
periplasmic serine protease, DO/DeqQ family rbh
Uncharacterized protein y4bJ; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
scnpilot_solids2_trim150_scaffold_1671_13
unknown

Not on your lists

11284..11571
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1671_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11708..13144
DNA (1437bp) protein (479aa)
Multicopper oxidase, type 3 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETT1_9RHIZ
Multicopper oxidase, type 3 {ECO:0000313|EMBL:CCV08369.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative multicopper oxidase domain protein
scnpilot_solids2_trim150_scaffold_1671_15
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13175..13615
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08368.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1671_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13663..13917
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6P2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11946.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative conserved periplasmic protein
Displaying 16 items

View Taxonomy