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scnpilot_solids2_trim150_scaffold_1685

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1685_1
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..118
DNA (117bp) protein (39aa)
Acetoin dehydrogenase E1 component beta subunit n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WYM8_9ACTO
Pyruvate dehydrogenase {ECO:0000313|EMBL:EWT03171.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
scnpilot_solids2_trim150_scaffold_1685_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115..348
DNA (234bp) protein (78aa)
biotin attachment protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036A43D9
Biotin attachment protein {ECO:0000313|EMBL:EWT03170.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
biotin/lipoyl attachment domain-containing protein
scnpilot_solids2_trim150_scaffold_1685_3
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

608..913
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HRG5_9PSEU
ArsR family transcriptional regulator {ECO:0000313|EMBL:EOD66150.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1685_4
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

910..1392
DNA (483bp) protein (161aa)
Activator of Hsp90 ATPase n=3 Tax=Amycolatopsis mediterranei RepID=D8I7P0_AMYMU
activator of Hsp90 ATPase
Activator of Hsp90 ATPase {ECO:0000313|EMBL:AEK44309.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
scnpilot_solids2_trim150_scaffold_1685_5
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1565..1867)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D6A5F
Uncharacterized protein {ECO:0000313|EMBL:KGN41197.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
chaperone locus transcriptional regulator, HspR
scnpilot_solids2_trim150_scaffold_1685_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2016..2453
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B2F88D
18 kDa heat shock protein {ECO:0000313|EMBL:KJL19879.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_solids2_trim150_scaffold_1685_7
unknown

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2489..2839
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1685_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3045..3422
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ASG5_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH48414.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_1685_9
unknown

Not on your lists

comp(3494..3751)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1685_10
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3859..5049
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000380F940 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE96775.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
ATPase central domain-containing protein
scnpilot_solids2_trim150_scaffold_1685_11
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5027..7414
DNA (2388bp) protein (796aa)
peptidase S8/S53 (EC:3.4.21.-)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003815363 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE96776.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
scnpilot_solids2_trim150_scaffold_1685_12
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7664..7882)
DNA (219bp) protein (73aa)
Putative phage excisionase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XKJ4_MICPN
putative phage excisionase
Putative phage excisionase {ECO:0000313|EMBL:BAK36066.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids2_trim150_scaffold_1685_13
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7915..11055)
DNA (3141bp) protein (1047aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000362C2C3
Conjugal transfer protein {ECO:0000313|EMBL:KGN40822.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
conjugative relaxase domain-containing protein
scnpilot_solids2_trim150_scaffold_1685_14
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11458..11715
DNA (258bp) protein (86aa)
transposase IS1554 n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B7A13F
Putative transposase {ECO:0000313|EMBL:GAB10475.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
transposase for IS2606
scnpilot_solids2_trim150_scaffold_1685_15
Propionibacterium sp. KPL1838, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11844..13055)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=5 Tax=Propionibacterium RepID=U1FC62_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS40435.1}; TaxID=1203572 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1838.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1685_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13117..13782)
DNA (666bp) protein (222aa)
Phage integrase family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XXR0_9ACTO
Phage integrase family protein {ECO:0000313|EMBL:EON24098.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
integrase
Displaying 16 items

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