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scnpilot_solids2_trim150_scaffold_1712

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1712_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1153)
DNA (1152bp) protein (384aa)
PREDICTED: metal transporter Nramp5-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19C45 rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:CDX56173.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
natural resistance-associated macrophage protein rbh
scnpilot_solids2_trim150_scaffold_1712_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1244..1804)
DNA (561bp) protein (187aa)
Cytochrome B561 n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLD9_9RHOB
Strain MEJ076 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIP97665.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein; K12262 cytochrome b561
scnpilot_solids2_trim150_scaffold_1712_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2111..3766
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003726302 rbh
sulfate transporter rbh
Sulphate transporter {ECO:0000313|EMBL:ABE62688.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_1712_4
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3983..4705)
DNA (723bp) protein (241aa)
Phosphoesterase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GU00_9RHIZ
Phosphoesterase {ECO:0000313|EMBL:ESY99197.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1712_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5282..6349)
DNA (1068bp) protein (356aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3C6_9BRAD
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EFI52456.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1712_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6476..7630)
DNA (1155bp) protein (385aa)
Cytochrome P450 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1D2_9RHIZ rbh
Cytochrome P450 {ECO:0000313|EMBL:EXL07944.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome P450 rbh
scnpilot_solids2_trim150_scaffold_1712_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7777..9075)
DNA (1299bp) protein (433aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTT2_PSEUU rbh
Monooxygenase {ECO:0000313|EMBL:EZQ15016.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase rbh
scnpilot_solids2_trim150_scaffold_1712_8
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9163..10515)
DNA (1353bp) protein (451aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hemN; oxygen-independent coproporphyrinogen-III oxidase HemN (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X937_RHIFR
scnpilot_solids2_trim150_scaffold_1712_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10710..10940)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B099_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56874.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_1712_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10995..11495)
DNA (501bp) protein (167aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBT3_OLICO
activator of Hsp90 ATPase 1 family protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07636.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1712_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11548..12240)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003644A29
Uncharacterized protein {ECO:0000313|EMBL:EZQ15023.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling
scnpilot_solids2_trim150_scaffold_1712_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12292..13533)
DNA (1242bp) protein (414aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM7_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EXL07935.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
nitric oxide reductase large subunit
Displaying 12 items

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