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scnpilot_solids2_trim150_scaffold_1736

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1736_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(127..423)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037C9E96
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40971.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_1736_2
unknown

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comp(879..1127)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1736_3
GWE2_OD1_40_11, Yanofskybacteria, Parcubacteria, Bacteria

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comp(1174..4092)
DNA (2919bp) protein (973aa)
Type III restriction protein res subunit id=2002568 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:KKR40564.1}; TaxID=1619033 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE2_40_11.;"
Type III restriction-modification enzyme, helicase subunit rbh
scnpilot_solids2_trim150_scaffold_1736_4
unknown

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4164..4448
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1736_5
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(4490..6484)
DNA (1995bp) protein (665aa)
adenine-specific DNA methylase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
Adenine-specific DNA methylase n=1 Tax=Prevotella sp. CAG:520 RepID=R6FSC0_9BACT rbh
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
scnpilot_solids2_trim150_scaffold_1736_6
GWC1_OP11_42_9, Woesebacteria, Microgenomates, Bacteria

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7117..7956
DNA (840bp) protein (280aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS78458.1}; TaxID=1618584 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC1_42_9.;"
scnpilot_solids2_trim150_scaffold_1736_7
unknown

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8460..8693
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B69A5
scnpilot_solids2_trim150_scaffold_1736_8
unknown

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8690..8941
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1736_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9249..9833)
DNA (585bp) protein (195aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN5_NIAKG
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEW02888.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1736_10
unknown

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9990..10109
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1736_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10078..12060)
DNA (1983bp) protein (661aa)
potassium transporter Kup n=1 Tax=Segetibacter koreensis RepID=UPI00037C8C0F rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein rbh
scnpilot_solids2_trim150_scaffold_1736_12
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12146..12325)
DNA (180bp) protein (60aa)
Transposase n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YPS3_CAPCC
Transposase {ECO:0000313|EMBL:KFF24975.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
transposase
scnpilot_solids2_trim150_scaffold_1736_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12419..12907)
DNA (489bp) protein (163aa)
transposase IS4 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B2FB9E
Transposase {ECO:0000313|EMBL:KFC17909.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
putative transposase for insertion sequence element
scnpilot_solids2_trim150_scaffold_1736_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13186..13386)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003731359
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AEW02097.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 14 items

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