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scnpilot_solids2_trim150_scaffold_1785

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1785_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..255)
DNA (255bp) protein (85aa)
Dinucleotide-utilizing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD2_9GAMM
Dinucleotide-utilizing protein {ECO:0000313|EMBL:EIM03074.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
scnpilot_solids2_trim150_scaffold_1785_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..744
DNA (390bp) protein (130aa)
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WY76_9GAMM
cytochrome c556
Cytochrome c556 {ECO:0000313|EMBL:AGG89741.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1785_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(853..1155)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03072.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1785_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1214..2089)
DNA (876bp) protein (292aa)
Pirin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC9_9GAMM rbh
Pirin {ECO:0000313|EMBL:EIM03071.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pirin-related protein rbh
scnpilot_solids2_trim150_scaffold_1785_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2108..3166)
DNA (1059bp) protein (353aa)
NADPH dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC8_9GAMM rbh
NADPH dehydrogenase {ECO:0000313|EMBL:EIM03070.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NADH:flavin oxidoreductase
scnpilot_solids2_trim150_scaffold_1785_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3219..4133)
DNA (915bp) protein (305aa)
Putative alpha/beta hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC7_9GAMM rbh
Putative alpha/beta hydrolase {ECO:0000313|EMBL:EIM03069.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative alpha/beta hydrolase
scnpilot_solids2_trim150_scaffold_1785_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4219..4428)
DNA (210bp) protein (70aa)
Cold shock protein n=2 Tax=Rhodanobacter RepID=I4WY71_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:EIM03068.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1785_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4685..4849)
DNA (165bp) protein (55aa)
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC5_9GAMM
Cold shock protein {ECO:0000313|EMBL:EIM03067.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
scnpilot_solids2_trim150_scaffold_1785_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5178..5645
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03066.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1785_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..6885)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03065.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1785_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7072..7593
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZZ1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1785_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7697..8791
DNA (1095bp) protein (365aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC2_9GAMM rbh
Phospholipase {ECO:0000313|EMBL:EIM03064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane phospholipase A
scnpilot_solids2_trim150_scaffold_1785_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8859..9341)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC1_9GAMM rbh
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_1785_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9430..9915)
DNA (486bp) protein (162aa)
Glutathione peroxidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC0_9GAMM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione peroxidase
scnpilot_solids2_trim150_scaffold_1785_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10015..11025
DNA (1011bp) protein (337aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WY63_9GAMM
ABC-type metal ion transport system, ATPase component
scnpilot_solids2_trim150_scaffold_1785_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11022..11699
DNA (678bp) protein (226aa)
ABC-type metal ion transport system permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WY62_9GAMM
ABC-type metal ion transport system, permease component
ABC-type metal ion transport system permease {ECO:0000313|EMBL:EIM03060.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1785_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11762..12562
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q6_9GAMM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
scnpilot_solids2_trim150_scaffold_1785_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12707..13891)
DNA (1185bp) protein (395aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB6_9GAMM rbh
nicotinate phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_1785_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14217..15023
DNA (807bp) protein (269aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB5_9GAMM rbh
Cytochrome c, class I {ECO:0000313|EMBL:EIM03057.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome c1
scnpilot_solids2_trim150_scaffold_1785_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15037..16131)
DNA (1095bp) protein (365aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89759.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1785_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16153..16566)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03055.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1785_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16709..17353)
DNA (645bp) protein (215aa)
Eggshell protein p48 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB2_9GAMM rbh
Eggshell protein p48 {ECO:0000313|EMBL:EIM03054.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
histone H1 family protein nucleoprotein HC2
scnpilot_solids2_trim150_scaffold_1785_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17443..17691)
DNA (249bp) protein (83aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 23 items

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