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scnpilot_solids2_trim150_scaffold_1817

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1817_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2259)
DNA (2259bp) protein (753aa)
Transposase, TnpA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFQ3_9GAMM
transposase, TnpA family
Transposase, TnpA family {ECO:0000313|EMBL:AGG88887.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2307..2657)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT14_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90355.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1817_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2724..4685)
DNA (1962bp) protein (654aa)
Heavy metal translocating p-type atpase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT13_9GAMM rbh
Heavy metal translocating p-type atpase {ECO:0000313|EMBL:EIL90354.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
heavy metal translocating p-type atpase
scnpilot_solids2_trim150_scaffold_1817_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4701..4979)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT12_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90353.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1817_5
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5057..6061
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUF4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM82230.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
scnpilot_solids2_trim150_scaffold_1817_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6178..6792
DNA (615bp) protein (205aa)
Type 12 methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNH8_9GAMM rbh
Type 12 methyltransferase {ECO:0000313|EMBL:EIL88769.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids2_trim150_scaffold_1817_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6862..7110)
DNA (249bp) protein (83aa)
Copper chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN1_9GAMM
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AGG88875.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7265..9703
DNA (2439bp) protein (813aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDR0_9GAMM rbh
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGG88874.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
copper/silver-translocating P-type ATPase rbh
scnpilot_solids2_trim150_scaffold_1817_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9716..10129
DNA (414bp) protein (138aa)
Cu(I)-responsive transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NGU2_9GAMM
Cu(I)-responsive transcriptional regulator
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:AGG88873.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10129..12114
DNA (1986bp) protein (662aa)
High-affinity Fe2+/Pb2+ permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP0_9GAMM rbh
high-affinity Fe2+/Pb2+ permease rbh
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:AGG88872.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12127..12756
DNA (630bp) protein (210aa)
RND OM export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ9_9GAMM rbh
RND OM export protein {ECO:0000313|EMBL:EIM01191.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Co/Zn/Cd efflux system component
scnpilot_solids2_trim150_scaffold_1817_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12753..13340
DNA (588bp) protein (196aa)
Transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK6_9GAMM
PAP2 superfamily protein
PAP2 superfamily protein {ECO:0000313|EMBL:AGG88870.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13371..14336)
DNA (966bp) protein (322aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ5_9GAMM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGG88869.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14429..14752)
DNA (324bp) protein (108aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG88868.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14749..15639)
DNA (891bp) protein (297aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL1_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIM01207.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_1817_16
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..16936
DNA (1227bp) protein (409aa)
Transposase mutator family protein (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WL71_9GAMM rbh
transposase mutator family protein; K07493 putative transposase rbh
Putative transposase {ECO:0000313|EMBL:ABD36387.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
scnpilot_solids2_trim150_scaffold_1817_17
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16927..17154)
DNA (228bp) protein (76aa)
Putative metal ion permease n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RWS3_9RHIZ
Putative metal ion permease {ECO:0000313|EMBL:ESR27455.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
scnpilot_solids2_trim150_scaffold_1817_18
unknown

Not on your lists

comp(17103..17285)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1817_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17489..18583)
DNA (1095bp) protein (365aa)
Copper resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI1_9GAMM rbh
Copper resistance protein {ECO:0000313|EMBL:EIL98572.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Copper resistance protein B
scnpilot_solids2_trim150_scaffold_1817_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18595..20370)
DNA (1776bp) protein (592aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW6_9GAMM
Copper resistance protein CopA {ECO:0000313|EMBL:AHX13411.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
copper-resistance protein, CopA family
scnpilot_solids2_trim150_scaffold_1817_21
unknown

Not on your lists

comp(20476..20748)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1817_22
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20774..21718)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL12 RepID=U9HN49_PSEAI rbh
Integrase catalytic region {ECO:0000313|EMBL:EGV33771.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
integrase catalytic subunit; K07497 putative transposase
scnpilot_solids2_trim150_scaffold_1817_23
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21715..22002)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037EBB16
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACV33561.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids2_trim150_scaffold_1817_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22384..22752
DNA (369bp) protein (123aa)
Putative cointegrase resolution protein n=2 Tax=Rhodanobacter RepID=I4WWN1_9GAMM
Putative cointegrase resolution protein {ECO:0000313|EMBL:EIL90322.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Plasmid replication region DNA-binding N-term
scnpilot_solids2_trim150_scaffold_1817_25
unknown

Not on your lists

23147..23482
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1817_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23763..25070
DNA (1308bp) protein (436aa)
Site-specific recombinase XerD n=1 Tax=Rhodanobacter denitrificans RepID=M4NGJ0_9GAMM
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGG89212.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1817_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25101..25475)
DNA (375bp) protein (125aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=2 Tax=Rhodanobacter RepID=M4NFY3_9GAMM
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Regulatory protein {ECO:0000313|EMBL:EIL90096.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Displaying 27 items

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