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scnpilot_solids2_trim150_scaffold_1821

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1821_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(612..1271)
DNA (660bp) protein (220aa)
Two component LuxR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW60_9GAMM rbh
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIL91451.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids2_trim150_scaffold_1821_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1479..3227
DNA (1749bp) protein (583aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW59_9GAMM rbh
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL91450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3HB-oligomer hydrolase (3HBOH)
scnpilot_solids2_trim150_scaffold_1821_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3335..3844
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW58_9GAMM rbh
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids2_trim150_scaffold_1821_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3980..4417
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1821_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4515..4769)
DNA (255bp) protein (85aa)
Transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW56_9GAMM
Transglycosylase {ECO:0000313|EMBL:EIL91447.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1821_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4921..6120
DNA (1200bp) protein (400aa)
Class I and II aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW55_9GAMM rbh
Class I and II aminotransferase {ECO:0000313|EMBL:EIL91446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate/tyrosine/aromatic aminotransferase rbh
scnpilot_solids2_trim150_scaffold_1821_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6211..7194
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW54_9GAMM rbh
malate dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1821_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7262..8290)
DNA (1029bp) protein (343aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW53_9GAMM rbh
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL91444.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator, MerR family/albicidin resistance protein
scnpilot_solids2_trim150_scaffold_1821_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8450..10345
DNA (1896bp) protein (632aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:EIL91443.1}; EC=6.2.1.17 {ECO:0000313|EMBL:EIL91443.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
propionyl-CoA synthetase (EC:6.2.1.17) rbh
Propionyl-CoA synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW52_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1821_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10409..12007)
DNA (1599bp) protein (533aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW51_9GAMM rbh
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL91442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
alkyl hydroperoxide reductase, F subunit rbh
scnpilot_solids2_trim150_scaffold_1821_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12188..12715)
DNA (528bp) protein (176aa)
Peroxiredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW50_9GAMM rbh
Peroxiredoxin {ECO:0000313|EMBL:EIL91441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peroxiredoxin
Displaying 11 items

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