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scnpilot_solids2_trim150_scaffold_1922

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1922_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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127..2295
DNA (2169bp) protein (723aa)
CoA-binding domain-containing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NR23_9RHIZ rbh
CoA-binding domain-containing protein {ECO:0000313|EMBL:EKF41840.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
acyl-CoA synthetase (NDP forming); K09181 hypothetical protein
scnpilot_solids2_trim150_scaffold_1922_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2308..3147
DNA (840bp) protein (280aa)
glutaconate CoA-transferase subunit A (EC:2.8.3.12); K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] rbh
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE43_9BRAD rbh
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit {ECO:0000313|EMBL:EIG58049.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
scnpilot_solids2_trim150_scaffold_1922_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3147..3914
DNA (768bp) protein (256aa)
CoA transferase, subunit B; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] rbh
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE42_9BRAD rbh
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit {ECO:0000313|EMBL:EIG58048.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
scnpilot_solids2_trim150_scaffold_1922_4
unknown

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comp(3822..4013)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1922_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4177..5010
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003622339
integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:CCN22560.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
scnpilot_solids2_trim150_scaffold_1922_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5007..6251
DNA (1245bp) protein (415aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Thauera sp. 28 RepID=N6ZK55_9RHOO rbh
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:EZQ13235.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_1922_7
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6544..7206)
DNA (663bp) protein (221aa)
Transposase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YL44_9RHIZ rbh
Transposase {ECO:0000313|EMBL:ERI12802.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
insertion sequence IS2A uncharacterized 48.2 kDa protein rbh
scnpilot_solids2_trim150_scaffold_1922_8
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7377..7643)
DNA (267bp) protein (89aa)
transposase IS3 n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035F9EFC
Insertion element ISR1 uncharacterized 10 kDa protein A3
Insertion element ISR1 uncharacterized 10 kDa protein A3 {ECO:0000313|EMBL:CDI12062.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
scnpilot_solids2_trim150_scaffold_1922_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7785..8483
DNA (699bp) protein (233aa)
Resolvase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BN3_RHOPB
resolvase
Resolvase {ECO:0000313|EMBL:ABD86203.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_1922_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8667..8846)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132Y8_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40851.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
scnpilot_solids2_trim150_scaffold_1922_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8868..10544)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132Y8_RHOPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE40851.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
scnpilot_solids2_trim150_scaffold_1922_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10569..12275
DNA (1707bp) protein (569aa)
Conjugative relaxase domain-containing protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIW7_AFIFE
Conjugative relaxase domain-containing protein {ECO:0000313|EMBL:EKS28409.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
Displaying 12 items

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