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scnpilot_solids2_trim150_scaffold_1961

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1961_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..252
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQS4_9GAMM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SSU ribosomal protein S16P
scnpilot_solids2_trim150_scaffold_1961_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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257..769
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S9_9GAMM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
16S rRNA processing protein RimM
scnpilot_solids2_trim150_scaffold_1961_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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803..1561
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC1_9GAMM
tRNA (guanine-N1)-methyltransferase
scnpilot_solids2_trim150_scaffold_1961_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1718..2113
DNA (396bp) protein (132aa)
50S ribosomal protein L19 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL2_9GAMM
ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1961_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2165..4225)
DNA (2061bp) protein (687aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH3_9GAMM
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG88342.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1961_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4357..5379)
DNA (1023bp) protein (341aa)
L-lysine 2,3-aminomutase (EC:5.4.3.2)
Lysine-2,3-aminomutase-related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL4_9GAMM
Lysine-2,3-aminomutase-related protein {ECO:0000313|EMBL:EIM01666.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1961_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5483..6049
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL5_9GAMM rbh
translation elongation factor P rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1961_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6135..7466
DNA (1332bp) protein (444aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCE1_9GAMM
cytosine deaminase-like metal-dependent hydrolase
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG88345.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1961_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7542..8249
DNA (708bp) protein (236aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC8_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1961_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8246..8932
DNA (687bp) protein (229aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphoglycolate phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL9_9GAMM
2-phosphoglycolate phosphatase
scnpilot_solids2_trim150_scaffold_1961_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8929..9855
DNA (927bp) protein (309aa)
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCH8_9GAMM
phytoene/squalene synthetase
Phytoene/squalene synthetase {ECO:0000313|EMBL:AGG88349.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1961_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9925..10851
DNA (927bp) protein (309aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5U0_9GAMM
scnpilot_solids2_trim150_scaffold_1961_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10937..12037)
DNA (1101bp) protein (367aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Dyella japonica RepID=UPI0002DF1F4E
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying 13 items

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