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scnpilot_solids2_trim150_scaffold_1970

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1970_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..1243)
DNA (1242bp) protein (414aa)
C4-dicarboxylate transport protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E966_9SPHI rbh
C4-dicarboxylate transport protein {ECO:0000313|EMBL:EDM37697.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein
scnpilot_solids2_trim150_scaffold_1970_2
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(1649..4249)
DNA (2601bp) protein (867aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000360548E rbh
hypothetical protein rbh
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_1970_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4323..5348
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
aspartate-semialdehyde dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037CA623 rbh
aspartate-semialdehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_1970_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5455..6804)
DNA (1350bp) protein (450aa)
aspartate transaminase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate transaminase {ECO:0000313|EMBL:AEW02313.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEW02313.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F67FB rbh
scnpilot_solids2_trim150_scaffold_1970_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6801..7973)
DNA (1173bp) protein (391aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHJ99639.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AHJ99639.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EC15A
scnpilot_solids2_trim150_scaffold_1970_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8076..8954)
DNA (879bp) protein (293aa)
Pirin domain-containing protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFS0_9FLAO rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KIA85807.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
pirin; K06911 rbh
scnpilot_solids2_trim150_scaffold_1970_7
unknown

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comp(9115..9222)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1970_8
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9277..10641)
DNA (1365bp) protein (455aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] rbh
transcriptional regulator n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C4CD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO80766.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_solids2_trim150_scaffold_1970_9
unknown

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comp(10853..11017)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1970_10
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11083..11316)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS69_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16721.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids2_trim150_scaffold_1970_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11329..11706)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24275.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
Displaying 11 items

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