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scnpilot_solids2_trim150_scaffold_1991

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1991_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1..672)
DNA (672bp) protein (224aa)
50S ribosomal protein L9 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EC76E3
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
scnpilot_solids2_trim150_scaffold_1991_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(713..1705)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LFU2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11893.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1991_3
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1835..2071)
DNA (237bp) protein (79aa)
30S ribosomal protein S18 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QJZ1_METTR
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270, ECO:0000313|EMBL:CCJ06748.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_1991_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2075..2494)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=2 Tax=Methylobacterium extorquens RepID=C5B2T0_METEA
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
scnpilot_solids2_trim150_scaffold_1991_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2848..3546
DNA (699bp) protein (233aa)
Methyltransferase FkbM n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY2_OLICO
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AEI05238.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3543..4208
DNA (666bp) protein (222aa)
GCN5-related N-acetyltransferase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JJY1_OLICO rbh
N-acetyltransferase GCN5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08223.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4311..5525
DNA (1215bp) protein (405aa)
Acyltransferase 3 n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY0_OLICO rbh
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:AEI08224.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_8
unknown

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5522..5662
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1991_9
unknown

Not on your lists

comp(5841..6347)
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1991_10
unknown

Not on your lists

comp(6322..7170)
DNA (849bp) protein (283aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1991_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7187..7546
DNA (360bp) protein (120aa)
Multicopper oxidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX9_OLICO
multicopper oxidase
Multicopper oxidase type 3 {ECO:0000313|EMBL:EFI52912.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_1991_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7577..7942
DNA (366bp) protein (122aa)
Copper resistance protein C n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY2_OLICM
copper resistance protein C; K07156
Copper resistance protein C {ECO:0000313|EMBL:AEI08226.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7942..8877
DNA (936bp) protein (312aa)
Putative copper resistance protein D n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY3_OLICM rbh
putative copper resistance protein D; K07245 putative copper resistance protein D rbh
Putative copper resistance protein D {ECO:0000313|EMBL:AEI08227.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8927..9400
DNA (474bp) protein (158aa)
Putative metal-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY4_OLICM rbh
putative metal-binding protein rbh
Putative metal-binding protein {ECO:0000313|EMBL:AEI08228.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9432..10577)
DNA (1146bp) protein (382aa)
Acyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY5_OLICM rbh
acyltransferase rbh
Acyltransferase {ECO:0000313|EMBL:AEI08229.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11008..11418)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05248.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_1991_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11567..11890)
DNA (324bp) protein (108aa)
Heavy metal efflux pump CusA n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG6_OLICM
cusA2; heavy metal efflux pump CusA
Heavy metal efflux pump CusA {ECO:0000313|EMBL:AEI05249.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 17 items

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