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scnpilot_solids2_trim150_scaffold_1995

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1995_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..336
DNA (336bp) protein (112aa)
RES domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHB2_9GAMM
RES domain-containing protein
RES domain-containing protein {ECO:0000313|EMBL:AGG87221.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1995_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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370..1050
DNA (681bp) protein (227aa)
Putative secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK0_9GAMM rbh
Putative secreted protein {ECO:0000313|EMBL:EIL97191.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
lysophospholipase L1-like esterase
scnpilot_solids2_trim150_scaffold_1995_3
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1087..1605)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQ19_9GAMM
Lipocalin-like domain protein {ECO:0000313|EMBL:AJC18383.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1995_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1666..2610
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXQ9_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ94709.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1995_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2614..3501)
DNA (888bp) protein (296aa)
Phenylalanine 4-hydroxylase (EC:1.14.16.1) rbh
Phenylalanine 4-hydroxylase {ECO:0000313|EMBL:AGG87223.1}; EC=1.14.16.1 {ECO:0000313|EMBL:AGG87223.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phenylalanine 4-hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCR8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_1995_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3641..4117
DNA (477bp) protein (159aa)
AsnC family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK3_9GAMM
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIL97194.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_1995_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4243..5052
DNA (810bp) protein (270aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUM1_9GAMM rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AGG87225.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1995_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5049..6068
DNA (1020bp) protein (340aa)
Putative hydrolase of the alpha/beta-hydrolase fold protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUM2_9GAMM rbh
putative hydrolase of the alpha/beta-hydrolase fold protein rbh
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:AGG87226.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1995_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6109..9528
DNA (3420bp) protein (1140aa)
Alpha-1,2-mannosidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK6_9GAMM rbh
Alpha-1,2-mannosidase {ECO:0000313|EMBL:EIL97197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
alpha-1,2-mannosidase, putative rbh
scnpilot_solids2_trim150_scaffold_1995_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9617..10228)
DNA (612bp) protein (204aa)
2OG-Fe(II) oxygenase family oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK7_9GAMM rbh
2OG-Fe(II) oxygenase family oxidoreductase {ECO:0000313|EMBL:EIL97198.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative proline hydroxylase rbh
scnpilot_solids2_trim150_scaffold_1995_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..10470)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97199.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1995_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10497..11309)
DNA (813bp) protein (271aa)
Putative methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NA25_9GAMM rbh
putative methyltransferase rbh
Putative methyltransferase {ECO:0000313|EMBL:AGG87230.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1995_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11405..11881)
DNA (477bp) protein (159aa)
ATPase AAA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCL0_9GAMM
ATPase AAA {ECO:0000313|EMBL:EIL97201.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
AAA+ family ATPase
Displaying 13 items

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