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scnpilot_solids2_trim150_scaffold_5075

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5075_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..627)
DNA (627bp) protein (209aa)
C-terminal processing peptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN52_9GAMM
C-terminal processing peptidase {ECO:0000313|EMBL:EIL88643.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
C-terminal processing peptidase
scnpilot_solids2_trim150_scaffold_5075_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(854..1555)
DNA (702bp) protein (234aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
Octanoyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAL4_9GAMM
lipoate-protein ligase B
scnpilot_solids2_trim150_scaffold_5075_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1555..1848)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCB0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL88640.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_5075_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1845..3086)
DNA (1242bp) protein (414aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI0003455C50
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EIL89549.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein 6
scnpilot_solids2_trim150_scaffold_5075_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3165..4034)
DNA (870bp) protein (290aa)
Rare lipoprotein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQQ9_9GAMM
Rare lipoprotein A {ECO:0000313|EMBL:EIL98329.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
rare lipoprotein A
scnpilot_solids2_trim150_scaffold_5075_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4031..5032)
DNA (1002bp) protein (334aa)
lytic murein transglycosylase n=1 Tax=Dyella japonica RepID=UPI0003132FF9
Lytic murein transglycosylase {ECO:0000313|EMBL:AHX15728.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
lytic murein transglycosylase B
scnpilot_solids2_trim150_scaffold_5075_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..6236)
DNA (1116bp) protein (372aa)
Rod shape-determining protein RodA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU0_9GAMM
cell elongation-specific peptidoglycan biosynthesis regulator RodA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5075_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..6805)
DNA (573bp) protein (191aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN44_9GAMM
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIL88635.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_5075_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6783..8234)
DNA (1452bp) protein (484aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN44_9GAMM
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIL88635.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_5075_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8231..8716)
DNA (486bp) protein (162aa)
Rod shape-determining protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQR3_9GAMM
Rod shape-determining protein {ECO:0000313|EMBL:EIL89554.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
rod shape-determining protein MreD
scnpilot_solids2_trim150_scaffold_5075_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8713..9705)
DNA (993bp) protein (331aa)
Cell shape-determining protein MreC n=1 Tax=Rhodanobacter denitrificans RepID=M4NCQ3_9GAMM
rod shape-determining protein MreC
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_5075_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9727..10773)
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU4_9GAMM rbh
rod shape-determining protein MreB rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIL98335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_5075_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10945..11160
DNA (216bp) protein (72aa)
sugar kinase; K00856 adenosine kinase [EC:2.7.1.20]
Sugar kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFU5_9GAMM
Sugar kinase {ECO:0000313|EMBL:EIL98336.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_5075_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11249..11929
DNA (681bp) protein (227aa)
Sugar kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN40_9GAMM
Sugar kinase {ECO:0000313|EMBL:EIL88631.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sugar kinase, ribokinase
Displaying 14 items

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