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scnpilot_solids2_trim150_scaffold_5312

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5312_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..286
DNA (285bp) protein (95aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA4_9GAMM
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:EIL99195.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative nucleoside-diphosphate sugar epimerase
scnpilot_solids2_trim150_scaffold_5312_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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283..1158
DNA (876bp) protein (292aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9) rbh
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-glucose pyrophosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK1_9GAMM rbh
scnpilot_solids2_trim150_scaffold_5312_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1237..2484
DNA (1248bp) protein (416aa)
FAD dependent oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA6_9GAMM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIL99197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycine/D-amino acid oxidase, deaminating
scnpilot_solids2_trim150_scaffold_5312_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2481..2828
DNA (348bp) protein (116aa)
tRNA-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA7_9GAMM
tRNA-binding protein {ECO:0000313|EMBL:EIL99198.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
EMAP domain-containing protein
scnpilot_solids2_trim150_scaffold_5312_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2930..3556
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99199.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids2_trim150_scaffold_5312_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3516..3662
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99199.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids2_trim150_scaffold_5312_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3678..4601)
DNA (924bp) protein (308aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X3_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL95214.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids2_trim150_scaffold_5312_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4776..5117
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88927.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5312_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5127..5552
DNA (426bp) protein (142aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK3_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88926.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5312_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5673..6149)
DNA (477bp) protein (159aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB1_9GAMM
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:EIL99202.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HhH-GPD superfamily base excision DNA repair protein
scnpilot_solids2_trim150_scaffold_5312_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6139..6792)
DNA (654bp) protein (218aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB2_9GAMM
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EIL99203.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
alkylated DNA repair protein
scnpilot_solids2_trim150_scaffold_5312_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7520)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXL0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5312_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7517..8593)
DNA (1077bp) protein (359aa)
O-6-methylguanine DNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS8_9GAMM rbh
O-6-methylguanine DNA methyltransferase rbh
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AGG88922.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5312_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8736..9437)
DNA (702bp) protein (234aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMJ7_9GAMM
Pirin-related protein
Pirin-related protein {ECO:0000313|EMBL:AGG88921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5312_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9556..9819)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88920.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 15 items

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